BLASTX nr result

ID: Glycyrrhiza23_contig00032441 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032441
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003619458.1| RING-H2 finger protein ATL3B [Medicago trunc...   122   4e-26
ref|XP_003534006.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   117   1e-24
gb|ACU17981.1| unknown [Glycine max]                                  117   1e-24
ref|XP_003548203.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-...   115   3e-24
dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]    112   2e-23

>ref|XP_003619458.1| RING-H2 finger protein ATL3B [Medicago truncatula]
           gi|355494473|gb|AES75676.1| RING-H2 finger protein ATL3B
           [Medicago truncatula]
          Length = 316

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/94 (60%), Positives = 72/94 (76%), Gaps = 1/94 (1%)
 Frame = -2

Query: 295 GVHPQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCI 116
           G++ +LL TFPIL YS++K+   ++  GPL+CAVCLTDF  +DTLRLLP+CNHVFHP CI
Sbjct: 97  GINKELLNTFPILFYSTIKDVKTDK--GPLECAVCLTDFKEQDTLRLLPKCNHVFHPQCI 154

Query: 115 DAWLSCHVTCPVCRANLNH-SHHFTVSIDAETNN 17
           D+WL+ HVTCPVCRANLN  S    ++I    NN
Sbjct: 155 DSWLASHVTCPVCRANLNQDSCQVAMTIPTNFNN 188


>ref|XP_003534006.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 362

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/99 (57%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 GVHPQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCI 116
           G++ +LL TFP L YS++K+   ++    L+CAVCLTDF  +D LRLLP+CNHVFHP CI
Sbjct: 98  GINRELLNTFPTLFYSNIKDL--KKGNETLECAVCLTDFTDKDALRLLPKCNHVFHPHCI 155

Query: 115 DAWLSCHVTCPVCRANLN-HSHHFTVSIDAETNNAAQGS 2
           D+WL+CHVTCPVCRANL+  S H  VSI    +N  +GS
Sbjct: 156 DSWLACHVTCPVCRANLSQESSH--VSITVPPHNEEEGS 192


>gb|ACU17981.1| unknown [Glycine max]
          Length = 362

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/99 (57%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
 Frame = -2

Query: 295 GVHPQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCI 116
           G++ +LL TFP L YS++K+   ++    L+CAVCLTDF  +D LRLLP+CNHVFHP CI
Sbjct: 98  GINRELLNTFPTLFYSNIKDL--KKGNETLECAVCLTDFTDKDALRLLPKCNHVFHPHCI 155

Query: 115 DAWLSCHVTCPVCRANLN-HSHHFTVSIDAETNNAAQGS 2
           D+WL+CHVTCPVCRANL+  S H  VSI    +N  +GS
Sbjct: 156 DSWLACHVTCPVCRANLSQESSH--VSITVPPHNEEEGS 192


>ref|XP_003548203.1| PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Glycine max]
          Length = 347

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/87 (60%), Positives = 66/87 (75%)
 Frame = -2

Query: 295 GVHPQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHVFHPPCI 116
           G++  LL TFP L YS++K+    +A   L+CAVCLTDF H+D+LRLLP+CNHVFHP CI
Sbjct: 88  GINKDLLNTFPTLFYSNIKDL--NKANQTLECAVCLTDFTHKDSLRLLPKCNHVFHPHCI 145

Query: 115 DAWLSCHVTCPVCRANLNHSHHFTVSI 35
           D+WL+ HVTCPVCRANL+      VSI
Sbjct: 146 DSWLTSHVTCPVCRANLSQESSCHVSI 172


>dbj|BAJ85025.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 397

 Score =  112 bits (281), Expect = 2e-23
 Identities = 48/83 (57%), Positives = 64/83 (77%)
 Frame = -2

Query: 313 SSRFEGGVHPQLLQTFPILCYSSLKNHINEEAEGPLQCAVCLTDFDHRDTLRLLPQCNHV 134
           S R + G+ P +L+TFP + Y+ +K H  +  +G L+CAVC+++FD  DTLRLLP+C+HV
Sbjct: 101 SRRQQRGLDPAVLETFPTMAYADVKEH--KAVKGALECAVCISEFDDDDTLRLLPKCSHV 158

Query: 133 FHPPCIDAWLSCHVTCPVCRANL 65
           FHP CID WL+ HVTCPVCRANL
Sbjct: 159 FHPDCIDTWLASHVTCPVCRANL 181


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