BLASTX nr result

ID: Glycyrrhiza23_contig00032428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032428
         (702 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   336   2e-90
ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent hel...   296   3e-78
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   295   5e-78
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   288   6e-76
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...   278   1e-72

>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 978

 Score =  336 bits (862), Expect = 2e-90
 Identities = 169/235 (71%), Positives = 197/235 (83%), Gaps = 1/235 (0%)
 Frame = +1

Query: 1    QRFCLFGGKLKVYLRTLWTHLPTCVIPFEVVKEMFRALDLLKSLETSMFQTKAKQVPEDC 180
            Q+FC FGGKLK  ++TL THLPT  +  +V  ++FR L+LLKSLE S+ Q+K KQ   D 
Sbjct: 466  QKFCCFGGKLKSLMKTLCTHLPTSFVSLKVAMKIFRVLELLKSLEVSLSQSKQKQSLNDH 525

Query: 181  ED-GESIFDCFGWLSFEREKFLHTLSSLSESIKLPNITSKYSILQFCLTNACLVFCTASG 357
               G+ IF  FGWLSFE+E+FLHTL  L E+IKLP +TSKY I QFCL NACL+FCTAS 
Sbjct: 526  FGVGQRIFSWFGWLSFEKEEFLHTLCFLCETIKLPKLTSKYGISQFCLKNACLLFCTASS 585

Query: 358  SSKLYTEGMKQMQFLVIDEAAQLKECESAIPLQLPGLNRCILIGDDRQLPAMVKSKIAER 537
            SSKLYTEGMK+++FLVIDEAAQLKECESAIPLQL GL RCILIGD+RQLPAMVKSKIA+R
Sbjct: 586  SSKLYTEGMKRVEFLVIDEAAQLKECESAIPLQLHGLKRCILIGDERQLPAMVKSKIADR 645

Query: 538  ADFGRSLFKRLVLLGYKRHMLNIQYRMHPSISTFPNKEFYEEQLSDAPIVRERSY 702
            A+FGRSLF+RLVLLGYK+HML++QYRMHPSIS FP+KEFY+ QLSDA IVRE SY
Sbjct: 646  AEFGRSLFERLVLLGYKKHMLDVQYRMHPSISMFPSKEFYDGQLSDANIVREISY 700


>ref|XP_003537422.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
            [Glycine max]
          Length = 925

 Score =  296 bits (758), Expect = 3e-78
 Identities = 144/226 (63%), Positives = 184/226 (81%)
 Frame = +1

Query: 25   KLKVYLRTLWTHLPTCVIPFEVVKEMFRALDLLKSLETSMFQTKAKQVPEDCEDGESIFD 204
            +L+ Y+RTL THLPT +IP E +K+M  ALDLL SLE S+ + K KQ  + CEDGESI D
Sbjct: 470  QLEEYMRTLHTHLPTSLIPLEEIKKMPVALDLLSSLENSLSKDKFKQTSDGCEDGESILD 529

Query: 205  CFGWLSFEREKFLHTLSSLSESIKLPNITSKYSILQFCLTNACLVFCTASGSSKLYTEGM 384
            C G LS + E+ L  L SLS++I LPNIT KY + +FCL +A L+FCTA+ S+KL+ +GM
Sbjct: 530  CLGRLSIKNEECLVKLRSLSQTISLPNITDKYEMAKFCLMSARLIFCTAASSTKLFADGM 589

Query: 385  KQMQFLVIDEAAQLKECESAIPLQLPGLNRCILIGDDRQLPAMVKSKIAERADFGRSLFK 564
              ++FLVIDEAAQLKECES IPLQLPGL+  ILIGD++QLPA+VKS++++ A++GRSLF+
Sbjct: 590  TPVEFLVIDEAAQLKECESTIPLQLPGLHHVILIGDEKQLPAVVKSQVSQEAEYGRSLFE 649

Query: 565  RLVLLGYKRHMLNIQYRMHPSISTFPNKEFYEEQLSDAPIVRERSY 702
            RLV LG+K+H+LN+QYRMHPSIS FPNKEFYE+QLSD+P VRE SY
Sbjct: 650  RLVSLGHKKHLLNVQYRMHPSISLFPNKEFYEKQLSDSPFVREVSY 695


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago truncatula]
            gi|355489654|gb|AES70857.1| DNA polymerase
            alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  295 bits (756), Expect = 5e-78
 Identities = 151/233 (64%), Positives = 181/233 (77%)
 Frame = +1

Query: 4    RFCLFGGKLKVYLRTLWTHLPTCVIPFEVVKEMFRALDLLKSLETSMFQTKAKQVPEDCE 183
            RF     +LK+  +TL+THLPT + PFE +K++  ALDLL SLE+SM + K KQ  +D  
Sbjct: 475  RFSSIVAELKLCKKTLYTHLPTSLFPFEEMKKIPIALDLLTSLESSMCKAKLKQTLDDHG 534

Query: 184  DGESIFDCFGWLSFEREKFLHTLSSLSESIKLPNITSKYSILQFCLTNACLVFCTASGSS 363
            DGESIFDC G L+   E  +  L SL + I LPNIT KY I +FCL NA L+FCTAS S+
Sbjct: 535  DGESIFDCLGRLNNTTEDCVCLLRSLLKKISLPNITEKYEIEKFCLMNASLIFCTASSST 594

Query: 364  KLYTEGMKQMQFLVIDEAAQLKECESAIPLQLPGLNRCILIGDDRQLPAMVKSKIAERAD 543
            +L+TEGM  ++FLVIDEAAQLKECESAIPLQLPGL+  +LIGD+RQLPA+VKS + E A 
Sbjct: 595  RLFTEGMTPIKFLVIDEAAQLKECESAIPLQLPGLHHAVLIGDERQLPAVVKSTVTEEAG 654

Query: 544  FGRSLFKRLVLLGYKRHMLNIQYRMHPSISTFPNKEFYEEQLSDAPIVRERSY 702
            +GRSLF+RLV LGYK+H+LN QYRMHPSIS FPNKEFYEEQL DAPIVRE SY
Sbjct: 655  YGRSLFERLVSLGYKKHLLNTQYRMHPSISLFPNKEFYEEQLVDAPIVREMSY 707


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 950

 Score =  288 bits (738), Expect = 6e-76
 Identities = 144/234 (61%), Positives = 175/234 (74%)
 Frame = +1

Query: 1    QRFCLFGGKLKVYLRTLWTHLPTCVIPFEVVKEMFRALDLLKSLETSMFQTKAKQVPEDC 180
            QRFC  GGKLK++++TL THLPTC +P +V K++FR L+LLKSLE               
Sbjct: 529  QRFCFIGGKLKLFMKTLCTHLPTCFLPIKVAKKVFRVLELLKSLEKEALH---------- 578

Query: 181  EDGESIFDCFGWLSFEREKFLHTLSSLSESIKLPNITSKYSILQFCLTNACLVFCTASGS 360
                           E+E+ LHTL  LSE+IKLP +TSKY I QFCL NACL+ CTAS  
Sbjct: 579  ---------------EKEELLHTLCFLSETIKLPKVTSKYGISQFCLKNACLLLCTASSC 623

Query: 361  SKLYTEGMKQMQFLVIDEAAQLKECESAIPLQLPGLNRCILIGDDRQLPAMVKSKIAERA 540
             KL++EGM Q++FLVIDEAAQLKECESAIPLQL GL RC+L+GD+ QLPAMVKS+IA+RA
Sbjct: 624  VKLFSEGMAQVEFLVIDEAAQLKECESAIPLQLNGLKRCVLVGDEIQLPAMVKSEIADRA 683

Query: 541  DFGRSLFKRLVLLGYKRHMLNIQYRMHPSISTFPNKEFYEEQLSDAPIVRERSY 702
             FGRSLF+RL  LGYK+HMLN+QYRMHPSIS FP++EFY ++LSD+ IVRE SY
Sbjct: 684  GFGRSLFERLATLGYKKHMLNVQYRMHPSISIFPSREFYNKKLSDSQIVREISY 737


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
            gi|355517466|gb|AES99089.1| Regulator of nonsense
            transcripts-like protein [Medicago truncatula]
          Length = 950

 Score =  278 bits (710), Expect = 1e-72
 Identities = 140/234 (59%), Positives = 177/234 (75%)
 Frame = +1

Query: 1    QRFCLFGGKLKVYLRTLWTHLPTCVIPFEVVKEMFRALDLLKSLETSMFQTKAKQVPEDC 180
            +RF     KLK  ++TL+THLP   I    VK+MFR L+LL+S+  S+ Q K K+  +DC
Sbjct: 474  KRFRELSEKLKFLIQTLYTHLPKSFISLATVKKMFRGLELLRSIGVSLHQAKFKKTLDDC 533

Query: 181  EDGESIFDCFGWLSFEREKFLHTLSSLSESIKLPNITSKYSILQFCLTNACLVFCTASGS 360
            E  E+I  CF   +FE ++FL  LS LS SI LP +  +  I +FCL+NACL+ CT S S
Sbjct: 534  EK-ENIPACFEPSNFEIDEFLRLLSLLSNSILLPELNGRGHIEKFCLSNACLILCTVSSS 592

Query: 361  SKLYTEGMKQMQFLVIDEAAQLKECESAIPLQLPGLNRCILIGDDRQLPAMVKSKIAERA 540
             KLYTEGM  ++FLVIDEAAQLKECES IPLQLPGL   ILIGD++QLPA+VKSKIA+  
Sbjct: 593  IKLYTEGMAHVKFLVIDEAAQLKECESMIPLQLPGLQHGILIGDEKQLPALVKSKIADNC 652

Query: 541  DFGRSLFKRLVLLGYKRHMLNIQYRMHPSISTFPNKEFYEEQLSDAPIVRERSY 702
             FGRS+F+RLV+LGYK+HMLN+QYRMHP+IS FP KEFY+EQ+SDAP+V++ SY
Sbjct: 653  GFGRSMFERLVMLGYKKHMLNVQYRMHPAISMFPCKEFYDEQISDAPVVKDASY 706


Top