BLASTX nr result

ID: Glycyrrhiza23_contig00032415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032415
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524006.1| ring finger protein, putative [Ricinus commu...   100   1e-19
gb|AFK44686.1| unknown [Lotus japonicus]                              100   2e-19
ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like...    99   3e-19
ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago ...    99   4e-19
gb|AAF01602.1|AC009895_23 unknown protein [Arabidopsis thaliana]       99   5e-19

>ref|XP_002524006.1| ring finger protein, putative [Ricinus communis]
           gi|223536733|gb|EEF38374.1| ring finger protein,
           putative [Ricinus communis]
          Length = 323

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/97 (54%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
 Frame = +1

Query: 121 MGSVSNSNSAA----LRDCSQGICSIYCPKWCYFIYSPPPPSFTLXXXXXXXXXXXXXXX 288
           MGSV N N  A     +DC+QGICSIYCP+WCY I+ PPPP F L               
Sbjct: 1   MGSVGNQNPWAPYDTYKDCTQGICSIYCPQWCYIIF-PPPPPFNL------GGSDDGGDS 53

Query: 289 XXXXXPLIVAIIGILASAFILVTYYTLISKFCSHRSN 399
                PLI+AIIGILASAFILV+YYT+ISK+C  R+N
Sbjct: 54  GTDFSPLIIAIIGILASAFILVSYYTIISKYCRRRNN 90


>gb|AFK44686.1| unknown [Lotus japonicus]
          Length = 302

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 6/102 (5%)
 Frame = +1

Query: 121 MGSVSNSN------SAALRDCSQGICSIYCPKWCYFIYSPPPPSFTLXXXXXXXXXXXXX 282
           MGS++N+N      +   +D SQG+CS+YCP+WCY IY PPPPS TL             
Sbjct: 1   MGSITNTNPLLAPPNPPFKDYSQGVCSLYCPQWCYIIYPPPPPSITL----GDDDPDGGD 56

Query: 283 XXXXXXXPLIVAIIGILASAFILVTYYTLISKFCSHRSNRTT 408
                  PL+VA+IGILAS FILVTYY++IS+FC  R    T
Sbjct: 57  SSAFEFSPLVVAVIGILASTFILVTYYSIISRFCRRRRGNPT 98


>ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
           gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2
           finger protein ATL51-like [Cucumis sativus]
          Length = 382

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/108 (49%), Positives = 67/108 (62%), Gaps = 3/108 (2%)
 Frame = +1

Query: 121 MGSVSNSNS---AALRDCSQGICSIYCPKWCYFIYSPPPPSFTLXXXXXXXXXXXXXXXX 291
           MGSV NSN     A +DCS  ICSIYCP+WCY I+ PPPP                    
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPP----------FGYGSNGDSA 50

Query: 292 XXXXPLIVAIIGILASAFILVTYYTLISKFCSHRSNRTTTNDQSTLDE 435
               PLI+AIIGILASAFILV+YYT+ISK+C +R+  +T+ND   +++
Sbjct: 51  TDFSPLIIAIIGILASAFILVSYYTIISKYCRNRA--STSNDAMEMED 96


>ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
           gi|355522814|gb|AET03268.1| hypothetical protein
           MTR_8g066780 [Medicago truncatula]
          Length = 356

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/88 (50%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 157 RDCSQGICSIYCPKWCYFIYSPPPPSFTLXXXXXXXXXXXXXXXXXXXXPLIVAIIGILA 336
           +DCSQG CS+YCP+WCY +Y+PPPP                        PL++AI+G+LA
Sbjct: 17  KDCSQGFCSVYCPQWCYIVYTPPPP---------PPFQYPDDDSKPYFSPLVIAILGVLA 67

Query: 337 SAFILVTYYTLISKFCSHR-SNRTTTND 417
           +AF+L+TYYTLISK+C HR S+R  TND
Sbjct: 68  TAFLLLTYYTLISKYCGHRESSRRNTND 95


>gb|AAF01602.1|AC009895_23 unknown protein [Arabidopsis thaliana]
          Length = 291

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 5/109 (4%)
 Frame = +1

Query: 121 MGSVSNSNS-----AALRDCSQGICSIYCPKWCYFIYSPPPPSFTLXXXXXXXXXXXXXX 285
           MGS  N N       + RDCSQG+CS+YCP+WCY I+ PPPPSF L              
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIF-PPPPSFYL--------DDEDDS 51

Query: 286 XXXXXXPLIVAIIGILASAFILVTYYTLISKFCSHRSNRTTTNDQSTLD 432
                 PL++A+IGILASAFILV+YYTLISK+C  R + +++   + ++
Sbjct: 52  SSSDFSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAIN 100


Top