BLASTX nr result

ID: Glycyrrhiza23_contig00032412 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032412
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatul...   193   1e-47
ref|XP_003518335.1| PREDICTED: putative tRNA pseudouridine synth...   183   1e-44
emb|CBI15850.3| unnamed protein product [Vitis vinifera]              155   2e-36
ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synth...   155   2e-36
emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]   155   2e-36

>ref|XP_003615971.1| Pseudouridylate synthase [Medicago truncatula]
           gi|355517306|gb|AES98929.1| Pseudouridylate synthase
           [Medicago truncatula]
          Length = 501

 Score =  193 bits (491), Expect = 1e-47
 Identities = 97/110 (88%), Positives = 102/110 (92%)
 Frame = +3

Query: 3   VAVKRKLLPRDITVLSLSKFSRIILPLAPSEVLILRGNNFSIRTKPGNVTRPEMQTIVES 182
           VAVKRKLLPRDI  LSLSKFSRIILPLAPSEVL+LRGN+FS+RTKPGNVTRPEMQTIVES
Sbjct: 372 VAVKRKLLPRDIITLSLSKFSRIILPLAPSEVLLLRGNSFSMRTKPGNVTRPEMQTIVES 431

Query: 183 EEINKVVDDFYTSVMLPQVSNFLDPSRFPWEEWIEKLDANTSISSDQLDE 332
           EEINKVVDDFY SVMLPQVS FLDPSR PW EWIEK DA+TSI +DQLDE
Sbjct: 432 EEINKVVDDFYRSVMLPQVSKFLDPSRVPWVEWIEKFDAHTSIPNDQLDE 481


>ref|XP_003518335.1| PREDICTED: putative tRNA pseudouridine synthase-like, partial
           [Glycine max]
          Length = 453

 Score =  183 bits (464), Expect = 1e-44
 Identities = 90/110 (81%), Positives = 99/110 (90%)
 Frame = +3

Query: 3   VAVKRKLLPRDITVLSLSKFSRIILPLAPSEVLILRGNNFSIRTKPGNVTRPEMQTIVES 182
           VAVKRK LP+DI  LSL++FSRIILPLAPSE LILRGN FSIRT+PGN+TRPEMQTIV+S
Sbjct: 340 VAVKRKALPKDIIKLSLTRFSRIILPLAPSEALILRGNRFSIRTRPGNITRPEMQTIVKS 399

Query: 183 EEINKVVDDFYTSVMLPQVSNFLDPSRFPWEEWIEKLDANTSISSDQLDE 332
           EEI K VDDFYTSVMLPQVS  LDPSR PW+EWIEKLDA+TSI +DQLDE
Sbjct: 400 EEIKKAVDDFYTSVMLPQVSKLLDPSRSPWDEWIEKLDAHTSIPNDQLDE 449


>emb|CBI15850.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/110 (70%), Positives = 93/110 (84%)
 Frame = +3

Query: 3   VAVKRKLLPRDITVLSLSKFSRIILPLAPSEVLILRGNNFSIRTKPGNVTRPEMQTIVES 182
           +AVKR+LLPRDI  LSL+KFSRI+LPLAPSEVLILRGN+FS+R KPGNV RPEM T++ES
Sbjct: 366 IAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMES 425

Query: 183 EEINKVVDDFYTSVMLPQVSNFLDPSRFPWEEWIEKLDANTSISSDQLDE 332
           EEI K VD+FYTSV+LPQVS FLDPS+ PW +W+E L   +SI   +LD+
Sbjct: 426 EEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDD 474


>ref|XP_002276856.1| PREDICTED: putative tRNA pseudouridine synthase-like [Vitis
           vinifera]
          Length = 564

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/110 (70%), Positives = 93/110 (84%)
 Frame = +3

Query: 3   VAVKRKLLPRDITVLSLSKFSRIILPLAPSEVLILRGNNFSIRTKPGNVTRPEMQTIVES 182
           +AVKR+LLPRDI  LSL+KFSRI+LPLAPSEVLILRGN+FS+R KPGNV RPEM T++ES
Sbjct: 387 IAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMES 446

Query: 183 EEINKVVDDFYTSVMLPQVSNFLDPSRFPWEEWIEKLDANTSISSDQLDE 332
           EEI K VD+FYTSV+LPQVS FLDPS+ PW +W+E L   +SI   +LD+
Sbjct: 447 EEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDD 495


>emb|CAN68579.1| hypothetical protein VITISV_034891 [Vitis vinifera]
          Length = 602

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/110 (70%), Positives = 93/110 (84%)
 Frame = +3

Query: 3   VAVKRKLLPRDITVLSLSKFSRIILPLAPSEVLILRGNNFSIRTKPGNVTRPEMQTIVES 182
           +AVKR+LLPRDI  LSL+KFSRI+LPLAPSEVLILRGN+FS+R KPGNV RPEM T++ES
Sbjct: 387 IAVKRELLPRDILTLSLTKFSRIVLPLAPSEVLILRGNSFSVRKKPGNVKRPEMLTLMES 446

Query: 183 EEINKVVDDFYTSVMLPQVSNFLDPSRFPWEEWIEKLDANTSISSDQLDE 332
           EEI K VD+FYTSV+LPQVS FLDPS+ PW +W+E L   +SI   +LD+
Sbjct: 447 EEILKSVDEFYTSVILPQVSKFLDPSKSPWHDWLENLTL-SSIPEAELDD 495


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