BLASTX nr result

ID: Glycyrrhiza23_contig00032410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032410
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Gl...   111   7e-23
ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medi...   107   8e-22
ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago tru...   104   6e-21
ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vi...    77   1e-12
emb|CBI32058.3| unnamed protein product [Vitis vinifera]               77   1e-12

>ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score =  111 bits (277), Expect = 7e-23
 Identities = 59/89 (66%), Positives = 65/89 (73%), Gaps = 8/89 (8%)
 Frame = +2

Query: 2    FSGQTVEFSKPKNLELTSVIVGVIFSVNHNI-------MRNQMPGVVDIQAKVLKQGEP- 157
            FSGQTV FSKPKNLEL  VIVGV+ S+NHNI        R  MPGV+D+QA VLKQG+  
Sbjct: 1220 FSGQTVCFSKPKNLELKGVIVGVVLSINHNINIGIPNMQREHMPGVLDVQANVLKQGKTL 1279

Query: 158  FSTTLNIGGVPKTGEEHIHLSRHQDYHPL 244
            FST LNI GVP+T EEHIHL R  DYH L
Sbjct: 1280 FSTVLNICGVPRTDEEHIHLCRFHDYHQL 1308


>ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
            gi|355522600|gb|AET03054.1| Leucine-rich
            repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score =  107 bits (268), Expect = 8e-22
 Identities = 54/81 (66%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
 Frame = +2

Query: 5    SGQTVEFSKPKNLELTSVIVGVIFSVNHNIMRNQMPGVVDIQAKVLKQGEP-FSTTLNIG 181
            S +TV FSK KNLELTSV++GVIFS+  N M+NQM GVVD+QAKVLK GE  FST+L IG
Sbjct: 1001 SRETVSFSKRKNLELTSVVIGVIFSIKQNNMKNQMSGVVDVQAKVLKLGEEIFSTSLYIG 1060

Query: 182  GVPKTGEEHIHLSRHQDYHPL 244
            GVP+T ++HI+L R  +YHPL
Sbjct: 1061 GVPRTDDQHIYLRRCNNYHPL 1081


>ref|XP_003628577.1| Tir-nbs-lrr resistance protein [Medicago truncatula]
            gi|355522599|gb|AET03053.1| Tir-nbs-lrr resistance
            protein [Medicago truncatula]
          Length = 1406

 Score =  104 bits (260), Expect = 6e-21
 Identities = 51/86 (59%), Positives = 64/86 (74%), Gaps = 5/86 (5%)
 Frame = +2

Query: 2    FSGQTVEFSKPKNLELTSVIVGVIFSVNHN----IMRNQMPGVVDIQAKVLKQG-EPFST 166
            FSG+TV FS  KNLELTSV+VGV+ S+NHN    I R +MPG++D++ KV K G + F T
Sbjct: 1190 FSGETVSFSNRKNLELTSVVVGVVVSINHNIHIPIKREEMPGIIDVEGKVFKHGKQKFGT 1249

Query: 167  TLNIGGVPKTGEEHIHLSRHQDYHPL 244
            TLNI GVP+T  +HIHL R Q+YH L
Sbjct: 1250 TLNIRGVPRTNVDHIHLCRFQNYHQL 1275


>ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
 Frame = +2

Query: 2    FSGQTVEFSKPKNLELTSVIVGVIFSVNHNI---MRNQMPGVVDIQAKVLKQG-EPFSTT 169
            FS     FSK KNL + +VI+GV+ S++H+I   +R+Q+P V  I+AK+L+   + F T 
Sbjct: 1226 FSRNVAIFSKRKNLVIKAVIIGVVVSLSHHIQDELRDQLPSVPGIEAKILRMNRQVFGTM 1285

Query: 170  LNIGGVPKTGEEHIHLSRHQDYHPL 244
            L++ GVPKT E+H++L R++++HP+
Sbjct: 1286 LDLTGVPKTDEDHLYLCRYREFHPI 1310


>emb|CBI32058.3| unnamed protein product [Vitis vinifera]
          Length = 1344

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
 Frame = +2

Query: 2    FSGQTVEFSKPKNLELTSVIVGVIFSVNHNI---MRNQMPGVVDIQAKVLKQG-EPFSTT 169
            FS     FSK KNL + +VI+GV+ S++H+I   +R+Q+P V  I+AK+L+   + F T 
Sbjct: 1132 FSRNVAIFSKRKNLVIKAVIIGVVVSLSHHIQDELRDQLPSVPGIEAKILRMNRQVFGTM 1191

Query: 170  LNIGGVPKTGEEHIHLSRHQDYHPL 244
            L++ GVPKT E+H++L R++++HP+
Sbjct: 1192 LDLTGVPKTDEDHLYLCRYREFHPI 1216



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
 Frame = +2

Query: 23  FSKPKNLELTSVIVGVIFSVN-----HNIMRNQMPGVVDIQAKVLKQGEP---FSTTLNI 178
           FS  +NL++T V++GV+  V+     HN   +++P +VD+QAK+ ++ E     STTL +
Sbjct: 201 FSSHRNLKVTGVVIGVVVCVSVNPQMHNAYSDKVPVIVDVQAKLFRRNEDKPVHSTTLKL 260

Query: 179 GGVPKTGEEHIHLSRHQDYHPL 244
            GV  T E+ ++L R  D+  L
Sbjct: 261 EGVADTNEDQLYLCRFLDFKSL 282


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