BLASTX nr result

ID: Glycyrrhiza23_contig00032404 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032404
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicag...   268   4e-70
ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2...   249   1e-64
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...   240   1e-61
emb|CBI28192.3| unnamed protein product [Vitis vinifera]              240   1e-61
ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup2...   239   1e-61

>ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicago truncatula]
           gi|355500517|gb|AES81720.1| Nuclear pore complex protein
           Nup205 [Medicago truncatula]
          Length = 2047

 Score =  268 bits (684), Expect = 4e-70
 Identities = 133/137 (97%), Positives = 135/137 (98%)
 Frame = +3

Query: 3   NSILDFVSEIYQKEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASK 182
           NSILDFVSEIY KEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASK
Sbjct: 553 NSILDFVSEIYLKEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASK 612

Query: 183 VYELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAQALVAYLNVLKK 362
           V+ELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDA+ALVAYLNVLKK
Sbjct: 613 VHELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAKALVAYLNVLKK 672

Query: 363 VVENGNPTERKNWFPDI 413
           VVENGNP ERKNWFPDI
Sbjct: 673 VVENGNPIERKNWFPDI 689


>ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]
          Length = 1931

 Score =  249 bits (637), Expect = 1e-64
 Identities = 122/127 (96%), Positives = 124/127 (97%)
 Frame = +3

Query: 33  YQKEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASKVYELLQGKAF 212
           YQKEPELL GNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLA SQEGASKVYELLQGKAF
Sbjct: 528 YQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLACSQEGASKVYELLQGKAF 587

Query: 213 RSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAQALVAYLNVLKKVVENGNPTER 392
           RSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDA+ALVAYLN+LKKVVENGNPTER
Sbjct: 588 RSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAKALVAYLNILKKVVENGNPTER 647

Query: 393 KNWFPDI 413
           K WFPDI
Sbjct: 648 KTWFPDI 654


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis
           vinifera]
          Length = 1934

 Score =  240 bits (612), Expect = 1e-61
 Identities = 113/136 (83%), Positives = 128/136 (94%)
 Frame = +3

Query: 6   SILDFVSEIYQKEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASKV 185
           S+L+FVSE+YQKEPELL GNDVLWTFVNFAGEDHTNFQTLVAFL ML TLASSQEGA KV
Sbjct: 513 SLLEFVSEVYQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLKMLGTLASSQEGALKV 572

Query: 186 YELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAQALVAYLNVLKKV 365
           +ELLQGK FRS+GWSTLF+CL+IY+EKFKQ+LQ+ GA+LPE QEGDA+ALVAYLNVL+KV
Sbjct: 573 FELLQGKTFRSVGWSTLFDCLSIYEEKFKQALQSPGAILPEFQEGDAKALVAYLNVLQKV 632

Query: 366 VENGNPTERKNWFPDI 413
           ++NGNP ERKNWFPDI
Sbjct: 633 MQNGNPVERKNWFPDI 648


>emb|CBI28192.3| unnamed protein product [Vitis vinifera]
          Length = 1889

 Score =  240 bits (612), Expect = 1e-61
 Identities = 113/136 (83%), Positives = 128/136 (94%)
 Frame = +3

Query: 6   SILDFVSEIYQKEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASKV 185
           S+L+FVSE+YQKEPELL GNDVLWTFVNFAGEDHTNFQTLVAFL ML TLASSQEGA KV
Sbjct: 449 SLLEFVSEVYQKEPELLSGNDVLWTFVNFAGEDHTNFQTLVAFLKMLGTLASSQEGALKV 508

Query: 186 YELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAQALVAYLNVLKKV 365
           +ELLQGK FRS+GWSTLF+CL+IY+EKFKQ+LQ+ GA+LPE QEGDA+ALVAYLNVL+KV
Sbjct: 509 FELLQGKTFRSVGWSTLFDCLSIYEEKFKQALQSPGAILPEFQEGDAKALVAYLNVLQKV 568

Query: 366 VENGNPTERKNWFPDI 413
           ++NGNP ERKNWFPDI
Sbjct: 569 MQNGNPVERKNWFPDI 584


>ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup205-like [Cucumis
           sativus]
          Length = 1849

 Score =  239 bits (611), Expect = 1e-61
 Identities = 112/136 (82%), Positives = 129/136 (94%)
 Frame = +3

Query: 6   SILDFVSEIYQKEPELLLGNDVLWTFVNFAGEDHTNFQTLVAFLNMLSTLASSQEGASKV 185
           S+L+FVSEIY++EPELL  NDVLWTF NFAGEDHTNFQTLVAFLNMLSTLA ++EGAS+V
Sbjct: 449 SLLEFVSEIYRQEPELLSSNDVLWTFANFAGEDHTNFQTLVAFLNMLSTLACNEEGASRV 508

Query: 186 YELLQGKAFRSIGWSTLFECLTIYDEKFKQSLQTAGAMLPEIQEGDAQALVAYLNVLKKV 365
           +ELLQGKAFRS+GW+TLF+CL+IYD+KF+QSLQT GA+LPE QEGDA+ALVAYLNVL+KV
Sbjct: 509 FELLQGKAFRSVGWTTLFDCLSIYDDKFRQSLQTVGALLPEFQEGDAKALVAYLNVLQKV 568

Query: 366 VENGNPTERKNWFPDI 413
           VENGNP ERKNWFPDI
Sbjct: 569 VENGNPVERKNWFPDI 584


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