BLASTX nr result

ID: Glycyrrhiza23_contig00032402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032402
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   196   2e-48
ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|2...   190   1e-46
ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinu...   188   4e-46
ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabi...   187   8e-46
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              187   1e-45

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1161

 Score =  196 bits (497), Expect = 2e-48
 Identities = 91/99 (91%), Positives = 95/99 (95%)
 Frame = +2

Query: 2   YPVRAHFLEDVLEMTGYKLTSFNQVDDYGQEKLWKTQKQLAPRKRKNQITTLVEDSLSKS 181
           YPVRAHFLED+LEMTGYKLTSFNQ+DDYGQEKLWKTQKQLAPRKRKNQIT LVED+LS S
Sbjct: 444 YPVRAHFLEDILEMTGYKLTSFNQIDDYGQEKLWKTQKQLAPRKRKNQITALVEDALSNS 503

Query: 182 SFENYSPRTRDSLSSWAPDCIGFNLIEAVLCHICRKERP 298
           SFENYS R RDSL+SWAPDCIGFNLIEAVLCHICRKERP
Sbjct: 504 SFENYSSRARDSLTSWAPDCIGFNLIEAVLCHICRKERP 542


>ref|XP_002310975.1| predicted protein [Populus trichocarpa] gi|222850795|gb|EEE88342.1|
           predicted protein [Populus trichocarpa]
          Length = 1020

 Score =  190 bits (482), Expect = 1e-46
 Identities = 87/99 (87%), Positives = 94/99 (94%)
 Frame = +2

Query: 2   YPVRAHFLEDVLEMTGYKLTSFNQVDDYGQEKLWKTQKQLAPRKRKNQITTLVEDSLSKS 181
           YPVRAHFLEDVLEMTGYKLTSFNQ+DDYGQEK+WKTQ+QLAPRKRKNQITTLVED+L+ S
Sbjct: 339 YPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKMWKTQRQLAPRKRKNQITTLVEDALTNS 398

Query: 182 SFENYSPRTRDSLSSWAPDCIGFNLIEAVLCHICRKERP 298
           SF+NYS R RDSL+ W PDCIGFNLIEAVLCHICRKERP
Sbjct: 399 SFDNYSSRARDSLARWMPDCIGFNLIEAVLCHICRKERP 437


>ref|XP_002514451.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223546447|gb|EEF47947.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1129

 Score =  188 bits (477), Expect = 4e-46
 Identities = 86/99 (86%), Positives = 94/99 (94%)
 Frame = +2

Query: 2   YPVRAHFLEDVLEMTGYKLTSFNQVDDYGQEKLWKTQKQLAPRKRKNQITTLVEDSLSKS 181
           YPVRAHFLEDVLEMTGYKLTSFNQ+DDYGQ+K+WKTQ+QLAPRKRKNQI TLVED+L+KS
Sbjct: 413 YPVRAHFLEDVLEMTGYKLTSFNQIDDYGQDKMWKTQRQLAPRKRKNQIATLVEDALNKS 472

Query: 182 SFENYSPRTRDSLSSWAPDCIGFNLIEAVLCHICRKERP 298
           SFE+YS R RDSL+ W PDCIGFNLIEAVLCHICRKERP
Sbjct: 473 SFESYSSRARDSLACWMPDCIGFNLIEAVLCHICRKERP 511


>ref|NP_680142.2| DEA(D/H)-box RNA helicase family protein [Arabidopsis thaliana]
           gi|10178028|dbj|BAB11511.1| ATP-dependent RNA helicase
           A-like protein [Arabidopsis thaliana]
           gi|332003418|gb|AED90801.1| DEA(D/H)-box RNA helicase
           family protein [Arabidopsis thaliana]
          Length = 1161

 Score =  187 bits (475), Expect = 8e-46
 Identities = 87/99 (87%), Positives = 95/99 (95%)
 Frame = +2

Query: 2   YPVRAHFLEDVLEMTGYKLTSFNQVDDYGQEKLWKTQKQLAPRKRKNQITTLVEDSLSKS 181
           +PV+AHFLEDVLE+TGYKLTSFNQVDDYGQEK WKTQKQL PRKRKNQITTLVE++LSKS
Sbjct: 441 HPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPRKRKNQITTLVEEALSKS 500

Query: 182 SFENYSPRTRDSLSSWAPDCIGFNLIEAVLCHICRKERP 298
           +FE+Y+ RTRDSLSSW PDCIGFNLIEAVLCHICRKERP
Sbjct: 501 NFESYNSRTRDSLSSWMPDCIGFNLIEAVLCHICRKERP 539


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  187 bits (474), Expect = 1e-45
 Identities = 86/99 (86%), Positives = 92/99 (92%)
 Frame = +2

Query: 2   YPVRAHFLEDVLEMTGYKLTSFNQVDDYGQEKLWKTQKQLAPRKRKNQITTLVEDSLSKS 181
           YPVRAHFLEDVLEMTGYKLTSFNQ+DDYGQEK+WKTQKQL PRKRKN+IT LVED+L+KS
Sbjct: 419 YPVRAHFLEDVLEMTGYKLTSFNQIDDYGQEKMWKTQKQLVPRKRKNKITALVEDALTKS 478

Query: 182 SFENYSPRTRDSLSSWAPDCIGFNLIEAVLCHICRKERP 298
           SFENYS   RDSLS W PDC+GFNLIEAVLCHICRKERP
Sbjct: 479 SFENYSSGVRDSLSCWTPDCMGFNLIEAVLCHICRKERP 517


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