BLASTX nr result

ID: Glycyrrhiza23_contig00032376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032376
         (455 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   164   5e-39
emb|CBI18929.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   142   2e-32
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...   142   4e-32
ref|NP_173449.1| pentatricopeptide repeat-containing protein [Ar...   136   2e-30

>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  164 bits (416), Expect = 5e-39
 Identities = 76/77 (98%), Positives = 77/77 (100%)
 Frame = +2

Query: 2   DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIFVRDT 181
           DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREI+VRDT
Sbjct: 672 DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDT 731

Query: 182 NRFHHFKDGVCSCGDFW 232
           NRFHHFKDGVCSCGDFW
Sbjct: 732 NRFHHFKDGVCSCGDFW 748


>emb|CBI18929.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/77 (84%), Positives = 67/77 (87%)
 Frame = +2

Query: 2   DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIFVRDT 181
           DKEQILCGHSEKLAVV GLLNT PG PLQVIKNLRIC DCH VIK IS  E REIFVRDT
Sbjct: 311 DKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDT 370

Query: 182 NRFHHFKDGVCSCGDFW 232
           NRFHHFK+G CSCGD+W
Sbjct: 371 NRFHHFKEGACSCGDYW 387


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/77 (84%), Positives = 67/77 (87%)
 Frame = +2

Query: 2   DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIFVRDT 181
           DKEQILCGHSEKLAVV GLLNT PG PLQVIKNLRIC DCH VIK IS  E REIFVRDT
Sbjct: 682 DKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIFVRDT 741

Query: 182 NRFHHFKDGVCSCGDFW 232
           NRFHHFK+G CSCGD+W
Sbjct: 742 NRFHHFKEGACSCGDYW 758


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  142 bits (357), Expect = 4e-32
 Identities = 67/77 (87%), Positives = 68/77 (88%)
 Frame = +2

Query: 2   DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIFVRDT 181
           DKEQILCGHSEKLAVVLGLLNT PG PLQVIKNLRIC DCHAVIK IS  E REIFVRDT
Sbjct: 640 DKEQILCGHSEKLAVVLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDT 699

Query: 182 NRFHHFKDGVCSCGDFW 232
           NRFH FK GVCSCGD+W
Sbjct: 700 NRFHQFKGGVCSCGDYW 716


>ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g20230 gi|332191832|gb|AEE29953.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  136 bits (343), Expect = 2e-30
 Identities = 62/77 (80%), Positives = 67/77 (87%)
 Frame = +2

Query: 2   DKEQILCGHSEKLAVVLGLLNTSPGQPLQVIKNLRICDDCHAVIKVISRLEGREIFVRDT 181
           ++EQ+L GHSEKLAVV GLLNT  G PLQVIKNLRIC DCHAVIK IS   GREIF+RDT
Sbjct: 684 EQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVIKFISSYAGREIFIRDT 743

Query: 182 NRFHHFKDGVCSCGDFW 232
           NRFHHFKDG+CSCGDFW
Sbjct: 744 NRFHHFKDGICSCGDFW 760


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