BLASTX nr result

ID: Glycyrrhiza23_contig00032354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032354
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817...   228   7e-58
ref|XP_003624721.1| Transcription factor IIIB 90 kDa subunit [Me...   190   2e-46
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ...   187   1e-45
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ...   187   1e-45
ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa ...   182   3e-44

>ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817609 [Glycine max]
          Length = 604

 Score =  228 bits (581), Expect = 7e-58
 Identities = 107/128 (83%), Positives = 120/128 (93%)
 Frame = +2

Query: 164 MVYCGHCAKNVAGEQLDDGYLCCGYCGKVLEDHYFSQEPTFVKNSAGQSKLSGSYVRTVQ 343
           MVYC HCAKNVAGE+LDDG+LCCG CG+VLED++F++EP+FVKN+AGQSKLSG+YVRTVQ
Sbjct: 1   MVYCSHCAKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAAGQSKLSGNYVRTVQ 60

Query: 344 SELSASRQRTLDRAYDEIKYLSFSLGVNDENMANQALAFYKIAIERNFTRGRKSEQVQAA 523
           SE S SRQRTLDRAYDEIKYLSF LGVNDE+MA QAL FYKIA+ERNFTRGRKSEQV AA
Sbjct: 61  SEYSESRQRTLDRAYDEIKYLSFGLGVNDEHMAEQALTFYKIALERNFTRGRKSEQVHAA 120

Query: 524 CLYIAFRH 547
           CLYIAFR+
Sbjct: 121 CLYIAFRY 128


>ref|XP_003624721.1| Transcription factor IIIB 90 kDa subunit [Medicago truncatula]
           gi|355499736|gb|AES80939.1| Transcription factor IIIB 90
           kDa subunit [Medicago truncatula]
          Length = 608

 Score =  190 bits (483), Expect = 2e-46
 Identities = 95/149 (63%), Positives = 116/149 (77%)
 Frame = +2

Query: 164 MVYCGHCAKNVAGEQLDDGYLCCGYCGKVLEDHYFSQEPTFVKNSAGQSKLSGSYVRTVQ 343
           MVYC HC KNV  E  ++ YL C  CGKVLED   ++EPTF KNSAGQSK+SG+ V+ V+
Sbjct: 1   MVYCDHCVKNVRAELHEECYLVCTSCGKVLEDQILTEEPTFTKNSAGQSKISGNLVKAVE 60

Query: 344 SELSASRQRTLDRAYDEIKYLSFSLGVNDENMANQALAFYKIAIERNFTRGRKSEQVQAA 523
            EL ASR+RTL RA  E++YLS SLGV++ ++  QA AFY+IA+ +NFTRGRKSEQV+AA
Sbjct: 61  -ELDASRKRTLYRASKEMEYLSLSLGVSEGDVVRQARAFYEIALAKNFTRGRKSEQVRAA 119

Query: 524 CLYIAFRHNNKPYLLIDFSNYLRTNVYVL 610
           CLY+AFR N KPY LI+FSN LR NVY L
Sbjct: 120 CLYLAFRQNKKPYFLIEFSNNLRINVYEL 148


>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 663

 Score =  187 bits (476), Expect = 1e-45
 Identities = 92/151 (60%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
 Frame = +2

Query: 164 MVYCGHCAKNVAGEQLDDGYLCCGYCGKVLEDHYFSQEPTFVKNSAGQSKLSGSYVRTVQ 343
           MV+C +C KNVAG + + G+L C  CGKVL+ + FSQEPTF K+S GQS+LSG++VR++Q
Sbjct: 1   MVWCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 344 SELSASRQRTLDRAYDEIKYL--SFSLGVNDENMANQALAFYKIAIERNFTRGRKSEQVQ 517
           S  SASR+RTL++A+++++Y+    ++G +DE +   A AFY+IA+ERNFTRGR +E VQ
Sbjct: 61  SNYSASRERTLNKAFEDMRYMRNGLNMGESDE-IIRVAGAFYRIALERNFTRGRNAEFVQ 119

Query: 518 AACLYIAFRHNNKPYLLIDFSNYLRTNVYVL 610
           AACLYIA R  NKPYLLIDFSNYLR NVYVL
Sbjct: 120 AACLYIACREKNKPYLLIDFSNYLRINVYVL 150


>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 643

 Score =  187 bits (476), Expect = 1e-45
 Identities = 92/151 (60%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
 Frame = +2

Query: 164 MVYCGHCAKNVAGEQLDDGYLCCGYCGKVLEDHYFSQEPTFVKNSAGQSKLSGSYVRTVQ 343
           MV+C +C KNVAG + + G+L C  CGKVL+ + FSQEPTF K+S GQS+LSG++VR++Q
Sbjct: 1   MVWCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 344 SELSASRQRTLDRAYDEIKYL--SFSLGVNDENMANQALAFYKIAIERNFTRGRKSEQVQ 517
           S  SASR+RTL++A+++++Y+    ++G +DE +   A AFY+IA+ERNFTRGR +E VQ
Sbjct: 61  SNYSASRERTLNKAFEDMRYMRNGLNMGESDE-IIRVAGAFYRIALERNFTRGRNAEFVQ 119

Query: 518 AACLYIAFRHNNKPYLLIDFSNYLRTNVYVL 610
           AACLYIA R  NKPYLLIDFSNYLR NVYVL
Sbjct: 120 AACLYIACREKNKPYLLIDFSNYLRINVYVL 150


>ref|XP_002269372.2| PREDICTED: transcription factor IIIB 90 kDa subunit-like [Vitis
           vinifera]
          Length = 529

 Score =  182 bits (463), Expect = 3e-44
 Identities = 89/150 (59%), Positives = 120/150 (80%), Gaps = 1/150 (0%)
 Frame = +2

Query: 164 MVYCGHCAKNVAGEQLDDGYLCCGYCGKVLEDHYFSQEPTFVKNSAGQSKLSGSYVRTVQ 343
           MV+C +CA++   E+L +GYLCC  CGKV++   FS +P FVKN+AGQS++SG++V+TVQ
Sbjct: 1   MVWCTNCARDCRTERLLNGYLCCTACGKVVDQDNFSNDPVFVKNAAGQSQMSGNFVKTVQ 60

Query: 344 SELSASRQRTLDRAYDEIKYLSFSLGVN-DENMANQALAFYKIAIERNFTRGRKSEQVQA 520
           S+ SASR+RTL+ AY EI +++ ++GV+  +++   ALAFY IA+ERNFTRGR+ EQV A
Sbjct: 61  SDYSASRERTLNDAYAEIGHIANAIGVSGGDSIIRPALAFYTIALERNFTRGRRKEQVAA 120

Query: 521 ACLYIAFRHNNKPYLLIDFSNYLRTNVYVL 610
           ACLYIA R N KP+LLIDFS +LR NVYVL
Sbjct: 121 ACLYIACRENKKPFLLIDFSEHLRINVYVL 150


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