BLASTX nr result

ID: Glycyrrhiza23_contig00032315 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032315
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein A...    79   3e-13
ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein A...    67   2e-09
ref|XP_002513558.1| ring finger protein, putative [Ricinus commu...    66   3e-09
ref|XP_004164426.1| PREDICTED: putative RING-H2 finger protein A...    66   3e-09
ref|XP_002267505.2| PREDICTED: probable receptor-like protein ki...    66   3e-09

>ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine
           max]
          Length = 582

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/107 (43%), Positives = 67/107 (62%), Gaps = 6/107 (5%)
 Frame = +3

Query: 30  SEPLLTLPESGDLVVKQISLENQRVWVNDPDECLPKRLMRDHGFNLKGSPFRISD-YYML 206
           ++ +LTLP  G+L VK I  E+Q + VNDPD CLPKR ++    ++  SPF ++   Y  
Sbjct: 71  TQTILTLPGFGNLTVKSIDYESQSIRVNDPDGCLPKRFLQKWSLSVSDSPFVLNPMIYGT 130

Query: 207 VDFN--FLNCPSNLTN---FALVRPISCLNFSSGDGDYSVVVTMSDP 332
           + FN  FL CPSN+T+   + LV PISCL   S + +YSV+ + S P
Sbjct: 131 IPFNLTFLRCPSNVTDSSQYPLV-PISCL---SNNSNYSVIASWSQP 173


>ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
           sativus] gi|449505086|ref|XP_004162372.1| PREDICTED:
           putative RING-H2 finger protein ATL21A-like [Cucumis
           sativus]
          Length = 393

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/97 (38%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = +3

Query: 30  SEPLLTLPESGDLVVKQISLENQRVWVNDPDECLPKRLMRDHGFNLKGSPFRISDYYMLV 209
           ++ +L+LP +GD+ V+ +  + QR+W+NDPD+C PKR++ D  F+L+ SPF  +  Y L 
Sbjct: 66  NQTILSLPNAGDVKVEIVDYKFQRLWINDPDQCFPKRILMD-SFSLEDSPFIYN--YRLD 122

Query: 210 DFNFLNCPSNLTN--FALVRPISCLNFSSGDGDYSVV 314
            F  LNC   +    F  VR I C++      +YSV+
Sbjct: 123 KFTVLNCSYYVETLPFDRVRRIKCMS----GANYSVI 155


>ref|XP_002513558.1| ring finger protein, putative [Ricinus communis]
           gi|223547466|gb|EEF48961.1| ring finger protein,
           putative [Ricinus communis]
          Length = 377

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/85 (44%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
 Frame = +3

Query: 39  LLTLPESGDLVVKQISLENQRVWVNDPDECLPKRLMRDHGFNLKGSPFRISDYYMLVDFN 218
           LL LP SG   V+ I    Q +W+NDP+ CLPKR++     NL  SPF +  +Y   +F 
Sbjct: 69  LLELPYSGTFTVQAIDYATQELWINDPNNCLPKRIL---SLNLSNSPF-VGLFYQ--NFT 122

Query: 219 FLNCP-SNLTNFALVRPISCLNFSS 290
           F NC  +N TNF L  PI+CL+ S+
Sbjct: 123 FFNCSLTNYTNFQL-NPIACLSSST 146


>ref|XP_004164426.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Cucumis
           sativus]
          Length = 358

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/86 (43%), Positives = 48/86 (55%)
 Frame = +3

Query: 33  EPLLTLPESGDLVVKQISLENQRVWVNDPDECLPKRLMRDHGFNLKGSPFRISDYYMLVD 212
           EPLL LP SGD +V+ I   +Q + +NDPD CLPKR++     NL GSPF   +   +  
Sbjct: 62  EPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKRILY---LNLSGSPFVKKNSQTVA- 117

Query: 213 FNFLNCPSNLTNFALVRPISCLNFSS 290
             F NC SN   +    PI CL+  S
Sbjct: 118 --FFNCSSNYIPYWYNDPIYCLSSHS 141


>ref|XP_002267505.2| PREDICTED: probable receptor-like protein kinase At5g39030-like
           [Vitis vinifera]
          Length = 598

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
 Frame = +3

Query: 30  SEPLLTLPESGDLVVKQISLENQRVWVNDPDECLPKRLMRDHGFNLKGSPFRI---SDYY 200
           +E +L LP S  ++VK IS E+  + V DP++CLP++L      +L  SPF     + + 
Sbjct: 69  NETILELPHSAKVLVKNISYESHEMMVQDPEKCLPRQL---QNLSLSASPFNFKLSNQWE 125

Query: 201 MLVDFNFLNCPSNLTNFALVRPISCLNFSSGDGDYSVVVTMS 326
            L DF F NC S     + V PI CL+      DY V   MS
Sbjct: 126 ALYDFTFFNCSSKKREMSYVDPIPCLSLP----DYPVYAVMS 163


Top