BLASTX nr result

ID: Glycyrrhiza23_contig00032294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032294
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616697.1| DNA repair and recombination protein RAD54-l...   208   4e-52
ref|XP_003545218.1| PREDICTED: uncharacterized protein LOC100811...   189   2e-46
ref|XP_003518422.1| PREDICTED: uncharacterized protein LOC100785...   171   8e-41
ref|XP_002520793.1| ATP-dependent helicase, putative [Ricinus co...   118   6e-25
gb|AET79246.1| chromatin remodeling 38 [Glycine max]                  114   7e-24

>ref|XP_003616697.1| DNA repair and recombination protein RAD54-like protein [Medicago
           truncatula] gi|355518032|gb|AES99655.1| DNA repair and
           recombination protein RAD54-like protein [Medicago
           truncatula]
          Length = 1380

 Score =  208 bits (530), Expect = 4e-52
 Identities = 112/168 (66%), Positives = 129/168 (76%), Gaps = 3/168 (1%)
 Frame = +3

Query: 3   LPHTKLLLGKFLTDXXXXXXXXXXXXXXFCARSAENKLVYQILGADTI-STSSNTESHID 179
           LPHTKLLLGKFL D              FCARS ENK+VYQILG D+  S+SSNTESHID
Sbjct: 218 LPHTKLLLGKFLIDLSWLVVTSVVKNVSFCARSVENKMVYQILGGDSSNSSSSNTESHID 277

Query: 180 VVNLRVDNGVLVPIVSQVAITNPRGAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYL 359
           V+  R D+G+LVPIVSQVAITN + A+HA ES  D+ S SY+V+GLRRSKRRHVQPERY+
Sbjct: 278 VIGFRTDDGMLVPIVSQVAITNTKRADHAHESRADEASSSYNVDGLRRSKRRHVQPERYV 337

Query: 360 GCEVSKLDVGSFRNRPPVRIDTSKD--DEMSLPLSCLFGLQQKNCPEE 497
           GCEV +LDVG+FRN PPVRI+TSK   DEMSLPLS LF L Q + PE+
Sbjct: 338 GCEVKELDVGTFRNMPPVRIETSKAVVDEMSLPLSFLFRLPQSS-PEK 384


>ref|XP_003545218.1| PREDICTED: uncharacterized protein LOC100811703 [Glycine max]
          Length = 1261

 Score =  189 bits (481), Expect = 2e-46
 Identities = 101/165 (61%), Positives = 119/165 (72%), Gaps = 5/165 (3%)
 Frame = +3

Query: 3   LPHTKLLLGKFLTDXXXXXXXXXXXXXXFCARSAENKLVYQILGADTISTSSNTESHIDV 182
           + HTKLLLGK L D               C RS ++KLVYQ+LG DT+STS N ESHIDV
Sbjct: 176 ISHTKLLLGKVLCDLSWLVVTTALKKVSICVRSLQDKLVYQVLGRDTVSTSLNNESHIDV 235

Query: 183 VNLRVDNGVLVPIVSQVAITNPRGAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYLG 362
           VN + D G+LVPIVSQVA    +  +   ESHEDKESPSY+VEGLRRSKRR+VQPERYLG
Sbjct: 236 VNFKTDKGMLVPIVSQVATLKTKRVDPEQESHEDKESPSYNVEGLRRSKRRNVQPERYLG 295

Query: 363 CE-VSKLDVGSFRNRPPVRIDTSKDD----EMSLPLSCLFGLQQK 482
           CE VS++DVGSFRN PPV+IDT KD+    EM +PL+ LF  Q+K
Sbjct: 296 CEKVSQIDVGSFRNLPPVKIDTWKDNDIDHEMYIPLAGLFRWQKK 340


>ref|XP_003518422.1| PREDICTED: uncharacterized protein LOC100785036 [Glycine max]
          Length = 1254

 Score =  171 bits (432), Expect = 8e-41
 Identities = 94/156 (60%), Positives = 109/156 (69%), Gaps = 3/156 (1%)
 Frame = +3

Query: 3   LPHTKLLLGKFLTDXXXXXXXXXXXXXX-FCARSAENKLVYQILGADT-ISTSSNTESHI 176
           + HTKLLLGK L D               FC RS E+KLVYQ+L  DT +STS N ESHI
Sbjct: 176 ISHTKLLLGKVLCDLSWLVVTTALKKKVSFCVRSLEDKLVYQVLERDTTVSTSLNNESHI 235

Query: 177 DVVNLRVDNGVLVPIVSQVAITNPRGAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERY 356
           DVVN + + G L  IVSQVA    +  E   ESHEDKESPSY+VEGLRRSKRR+VQPERY
Sbjct: 236 DVVNFKTEKGTLFSIVSQVATLKTKRVEPEQESHEDKESPSYNVEGLRRSKRRNVQPERY 295

Query: 357 LGCE-VSKLDVGSFRNRPPVRIDTSKDDEMSLPLSC 461
           LGCE VS++DVGSFRN PPV+I+T KDD++    SC
Sbjct: 296 LGCEKVSQIDVGSFRNLPPVKINTWKDDKVKKASSC 331


>ref|XP_002520793.1| ATP-dependent helicase, putative [Ricinus communis]
           gi|223539924|gb|EEF41502.1| ATP-dependent helicase,
           putative [Ricinus communis]
          Length = 1246

 Score =  118 bits (295), Expect = 6e-25
 Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
 Frame = +3

Query: 12  TKLLLGKFLTDXXXXXXXXXXXXXXFCARSAENKLVYQILGADTISTSSNTESHIDVVNL 191
           TKL +GKF +D              F  RS +NK+VYQILG D   +S    +H++ ++ 
Sbjct: 177 TKLFIGKFCSDLTWLVVASVMRQIAFDVRSVQNKIVYQILGCDDDCSSIKPNNHLNALSF 236

Query: 192 RVDNGVLVPIVSQVAITNPRGAEHAPESHEDKESPSYDVEGLRRSKRRHVQPERYLGCEV 371
           +V+N +L P+V Q A   P  A+ AP+ +      +Y V+ LRRSKRR+VQPER+LGC++
Sbjct: 237 KVENDILTPLVLQFA---PTEADPAPDMYGVDSDEAYSVKNLRRSKRRNVQPERFLGCDL 293

Query: 372 SK-LDVGSFRNRPPVRIDTSKDDEMSLPLSCLFGLQQKNCPEEEDAD 509
               DVG  R+  P + +  K+DEM LPLS LFG    + PE+ + +
Sbjct: 294 PPGADVGWVRSM-PYKPEKWKEDEMFLPLSFLFGQNASSSPEKIEGE 339


>gb|AET79246.1| chromatin remodeling 38 [Glycine max]
          Length = 1245

 Score =  114 bits (286), Expect = 7e-24
 Identities = 72/162 (44%), Positives = 100/162 (61%), Gaps = 10/162 (6%)
 Frame = +3

Query: 3   LPHTKLLLGKFLTDXXXXXXXXXXXXXXFCARSAENKLVYQILGADTISTSSNTESHIDV 182
           +PHTKLL GKF++D              FCARS EN +VYQILG+D  ++S   +S I V
Sbjct: 190 VPHTKLL-GKFISDLSWLVVASAIRKVSFCARSVENNIVYQILGSDATTSSLYMDSEISV 248

Query: 183 VNLRV-DNGVLVPIVSQVAI----TNPRGAEHAPESHEDKESPSYDVEGLRRSKRRHVQP 347
           VN +V ++G+ +P++  V +    TN  G +H  +SH D+   SY  EGLRRSKRR++QP
Sbjct: 249 VNFKVNEDGMQMPVIHLVDLFETDTNTSGDKH--DSHYDEVPSSYGFEGLRRSKRRNIQP 306

Query: 348 ERYLGC-EVSKLDVGSFRNRPPVRIDTSKDD----EMSLPLS 458
           ERY  C  VS++ VG+ R   P +++  KDD    E SLPL+
Sbjct: 307 ERYSDCGNVSEIKVGNVRTW-PYKLNKRKDDDGGGEESLPLA 347


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