BLASTX nr result

ID: Glycyrrhiza23_contig00032293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032293
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containi...   144   8e-33
ref|XP_003593731.1| Pentatricopeptide repeat-containing protein ...   144   8e-33
emb|CBI30660.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containi...   124   6e-27
emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]   124   6e-27

>ref|XP_003541711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial-like [Glycine max]
          Length = 525

 Score =  144 bits (363), Expect = 8e-33
 Identities = 70/84 (83%), Positives = 77/84 (91%)
 Frame = -2

Query: 253 FDVTSEKNVISSTSLISGYMNQGSFNDAECIFQKTLNKDVVVFNAMIEGYSRTPEHAMRS 74
           FDV SEKNV+ STSLISGYMNQGS  DAECIF KT++KDVV FNAMIEGYS+T E+AMRS
Sbjct: 199 FDVMSEKNVVCSTSLISGYMNQGSIEDAECIFLKTMDKDVVAFNAMIEGYSKTSEYAMRS 258

Query: 73  LEVYIDMQRLNFRPNLSTFASIIG 2
           LEVYIDMQRLNFRPN+STFAS+IG
Sbjct: 259 LEVYIDMQRLNFRPNVSTFASVIG 282


>ref|XP_003593731.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355482779|gb|AES63982.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  144 bits (363), Expect = 8e-33
 Identities = 73/84 (86%), Positives = 79/84 (94%)
 Frame = -2

Query: 253 FDVTSEKNVISSTSLISGYMNQGSFNDAECIFQKTLNKDVVVFNAMIEGYSRTPEHAMRS 74
           FDV SEKNVISSTSLISGYMN+G F+DAE IF+KTL+KDVVVFNAMIEGYS+  E+AMRS
Sbjct: 200 FDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKVSEYAMRS 259

Query: 73  LEVYIDMQRLNFRPNLSTFASIIG 2
           LEVYIDMQRLNFRPNLSTFASIIG
Sbjct: 260 LEVYIDMQRLNFRPNLSTFASIIG 283


>emb|CBI30660.3| unnamed protein product [Vitis vinifera]
          Length = 598

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 FDVTSEKNVISSTSLISGYMNQGSFNDAECIFQKTLNKDVVVFNAMIEGYSRTPEHAMRS 74
           FD+  +KNV+ STS+ISGYM+QGS  DAE IF++T+ KDVVVFNAMIEGYS++ E A RS
Sbjct: 207 FDMMLDKNVLCSTSMISGYMSQGSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRS 266

Query: 73  LEVYIDMQRLNFRPNLSTFASIIG 2
           LEVYIDMQRLNFRP +STFAS+IG
Sbjct: 267 LEVYIDMQRLNFRPTMSTFASVIG 290


>ref|XP_002267303.1| PREDICTED: pentatricopeptide repeat-containing protein At1g28690,
           mitochondrial [Vitis vinifera]
          Length = 533

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 FDVTSEKNVISSTSLISGYMNQGSFNDAECIFQKTLNKDVVVFNAMIEGYSRTPEHAMRS 74
           FD+  +KNV+ STS+ISGYM+QGS  DAE IF++T+ KDVVVFNAMIEGYS++ E A RS
Sbjct: 207 FDMMLDKNVLCSTSMISGYMSQGSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRS 266

Query: 73  LEVYIDMQRLNFRPNLSTFASIIG 2
           LEVYIDMQRLNFRP +STFAS+IG
Sbjct: 267 LEVYIDMQRLNFRPTMSTFASVIG 290


>emb|CAN75464.1| hypothetical protein VITISV_006518 [Vitis vinifera]
          Length = 504

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/84 (72%), Positives = 73/84 (86%)
 Frame = -2

Query: 253 FDVTSEKNVISSTSLISGYMNQGSFNDAECIFQKTLNKDVVVFNAMIEGYSRTPEHAMRS 74
           FD+  +KNV+ STS+ISGYM+QGS  DAE IF++T+ KDVVVFNAMIEGYS++ E A RS
Sbjct: 207 FDMMLDKNVLCSTSMISGYMSQGSVEDAEDIFKRTVEKDVVVFNAMIEGYSKSVETARRS 266

Query: 73  LEVYIDMQRLNFRPNLSTFASIIG 2
           LEVYIDMQRLNFRP +STFAS+IG
Sbjct: 267 LEVYIDMQRLNFRPTMSTFASVIG 290


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