BLASTX nr result

ID: Glycyrrhiza23_contig00032288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032288
         (462 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containi...   267   6e-70
ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi...   267   8e-70
ref|XP_003624580.1| Pentatricopeptide repeat-containing protein ...   265   4e-69
ref|XP_002319140.1| predicted protein [Populus trichocarpa] gi|2...   242   3e-62
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   242   3e-62

>ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 612

 Score =  267 bits (683), Expect = 6e-70
 Identities = 128/153 (83%), Positives = 139/153 (90%)
 Frame = +3

Query: 3   VTPDVVTYNSLIKPLCKARKINEAKGIFDEMLKRCISPTIQTFHPFFHILRTKEEIFELL 182
           VTPDVVTYNSLIKPLCKA K++EAK +FDEMLKR +SPTIQTFH FF ILRTKEE+FELL
Sbjct: 401 VTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFRILRTKEEVFELL 460

Query: 183 DKMRELGCQPTIETYIMLIRKFCRWRQLDDVSKIWNAMRENGVSHDRSSYIVLIHGLFLN 362
           DKM+EL C PTIETYIMLIRKFCRW QLDDV KIW+AMRE+ +SHDRSSYIVLIHGLFLN
Sbjct: 461 DKMKELRCYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLN 520

Query: 363 GKLEEAHKYYIEMLEKGFFPEPKTEEMLQAWLS 461
           GKLEEA +YY EM EKGF PEPKTEEMLQAW+S
Sbjct: 521 GKLEEAQRYYAEMQEKGFLPEPKTEEMLQAWVS 553


>ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
           mitochondrial-like [Glycine max]
          Length = 516

 Score =  267 bits (682), Expect = 8e-70
 Identities = 126/153 (82%), Positives = 140/153 (91%)
 Frame = +3

Query: 3   VTPDVVTYNSLIKPLCKARKINEAKGIFDEMLKRCISPTIQTFHPFFHILRTKEEIFELL 182
           VTP+VVTYNSLIKPLCKA K++EAK +F E+LKR +SPTIQTFH FF ILRTKEE+FELL
Sbjct: 305 VTPNVVTYNSLIKPLCKAGKVDEAKQLFYEILKRHLSPTIQTFHAFFRILRTKEEVFELL 364

Query: 183 DKMRELGCQPTIETYIMLIRKFCRWRQLDDVSKIWNAMRENGVSHDRSSYIVLIHGLFLN 362
           DKM+ELGC PTIETYIML+RKFCRWRQLDDV K+W+AMRE+G+ HDRSSYIVLIHGLFLN
Sbjct: 365 DKMKELGCYPTIETYIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLN 424

Query: 363 GKLEEAHKYYIEMLEKGFFPEPKTEEMLQAWLS 461
           GKLEEAH YY EM EKGF PEPKTEEMLQAW+S
Sbjct: 425 GKLEEAHTYYAEMQEKGFLPEPKTEEMLQAWVS 457


>ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355499595|gb|AES80798.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  265 bits (676), Expect = 4e-69
 Identities = 125/153 (81%), Positives = 139/153 (90%)
 Frame = +3

Query: 3   VTPDVVTYNSLIKPLCKARKINEAKGIFDEMLKRCISPTIQTFHPFFHILRTKEEIFELL 182
           VTPD +TYNSLIKPLCKARKI+EAK IF+ ML+R ISP+I+TFH FF ILR KEE+FELL
Sbjct: 374 VTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHAFFRILRVKEEVFELL 433

Query: 183 DKMRELGCQPTIETYIMLIRKFCRWRQLDDVSKIWNAMRENGVSHDRSSYIVLIHGLFLN 362
           DKM+ELGC PTIETYIMLIRKFCRWRQLD+V +IWNAMRE+G+ HDRSSYIVLIHGLFLN
Sbjct: 434 DKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLN 493

Query: 363 GKLEEAHKYYIEMLEKGFFPEPKTEEMLQAWLS 461
            K+EEA+KYYIEM EKGF PEPKTE MLQAWLS
Sbjct: 494 CKVEEAYKYYIEMQEKGFLPEPKTESMLQAWLS 526


>ref|XP_002319140.1| predicted protein [Populus trichocarpa] gi|222857516|gb|EEE95063.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  242 bits (617), Expect = 3e-62
 Identities = 111/153 (72%), Positives = 131/153 (85%)
 Frame = +3

Query: 3   VTPDVVTYNSLIKPLCKARKINEAKGIFDEMLKRCISPTIQTFHPFFHILRTKEEIFELL 182
           V P++VTYNSLIKPLC+ARK+ EAKG FD+MLKRCISPTI+T+H F  ILRT EE+F LL
Sbjct: 76  VAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALL 135

Query: 183 DKMRELGCQPTIETYIMLIRKFCRWRQLDDVSKIWNAMRENGVSHDRSSYIVLIHGLFLN 362
           +KMR++GCQP  +TYIMLIRKFCRWRQL++V K+W+ M ENG+S DRSSYIVLIHGLFLN
Sbjct: 136 EKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLN 195

Query: 363 GKLEEAHKYYIEMLEKGFFPEPKTEEMLQAWLS 461
           G+L+ AHKYY EM EK   PEPK +EMLQ WLS
Sbjct: 196 GELDAAHKYYTEMKEKQLLPEPKIDEMLQTWLS 228


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  242 bits (617), Expect = 3e-62
 Identities = 111/153 (72%), Positives = 131/153 (85%)
 Frame = +3

Query: 3   VTPDVVTYNSLIKPLCKARKINEAKGIFDEMLKRCISPTIQTFHPFFHILRTKEEIFELL 182
           V P++VTYNSLIKPLC+ARK+ EAKG FD+MLKRCISPTI+T+H F  ILRT EE+F LL
Sbjct: 298 VAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALL 357

Query: 183 DKMRELGCQPTIETYIMLIRKFCRWRQLDDVSKIWNAMRENGVSHDRSSYIVLIHGLFLN 362
           +KMR++GCQP  +TYIMLIRKFCRWRQL++V K+W+ M ENG+S DRSSYIVLIHGLFLN
Sbjct: 358 EKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLN 417

Query: 363 GKLEEAHKYYIEMLEKGFFPEPKTEEMLQAWLS 461
           G+L+ AHKYY EM EK   PEPK +EMLQ WLS
Sbjct: 418 GELDAAHKYYTEMKEKQLLPEPKIDEMLQTWLS 450


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