BLASTX nr result

ID: Glycyrrhiza23_contig00032279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032279
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605955.1| DNA repair protein RAD5 [Medicago truncatula...   165   3e-39
ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like...   162   2e-38
ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like...   162   2e-38
ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like...   154   5e-36
emb|CBI28814.3| unnamed protein product [Vitis vinifera]              154   5e-36

>ref|XP_003605955.1| DNA repair protein RAD5 [Medicago truncatula]
           gi|355507010|gb|AES88152.1| DNA repair protein RAD5
           [Medicago truncatula]
          Length = 935

 Score =  165 bits (418), Expect = 3e-39
 Identities = 84/101 (83%), Positives = 86/101 (85%)
 Frame = +3

Query: 3   RRAMXXXXXXXXXXXXXRRTKIGRAADLALPPRIVSLRRDSLDMKEQDYYESLYNESQAQ 182
           +RAM             RRTKIGRAADLALPPRIVSLRRDSLD+KEQDYYESLYNESQAQ
Sbjct: 565 KRAMILLKNKLLKSIVLRRTKIGRAADLALPPRIVSLRRDSLDIKEQDYYESLYNESQAQ 624

Query: 183 FNTYVEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPTAA 305
           FNTYVE NTL NNYAHIFDLLTRLRQAVDHPYLVVYSPTAA
Sbjct: 625 FNTYVEENTLTNNYAHIFDLLTRLRQAVDHPYLVVYSPTAA 665


>ref|XP_003541950.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 924

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +3

Query: 3   RRAMXXXXXXXXXXXXXRRTKIGRAADLALPPRIVSLRRDSLDMKEQDYYESLYNESQAQ 182
           +RAM             RRTKIGRAADLALPPRIVSLRRD LD+KEQDYYESLYNESQAQ
Sbjct: 554 KRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRRDCLDIKEQDYYESLYNESQAQ 613

Query: 183 FNTYVEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPTAA 305
           FNTY+EANTLMNNYAHIFDLLTRLRQAVDHPYLVVYS +AA
Sbjct: 614 FNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSQSAA 654


>ref|XP_003539500.1| PREDICTED: ATP-dependent helicase rhp16-like [Glycine max]
          Length = 926

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/101 (81%), Positives = 86/101 (85%)
 Frame = +3

Query: 3   RRAMXXXXXXXXXXXXXRRTKIGRAADLALPPRIVSLRRDSLDMKEQDYYESLYNESQAQ 182
           +RAM             RRTKIGRAADLALPPRIVSLRRD LD+KEQDYYESLYNESQAQ
Sbjct: 556 KRAMILLKHKVLKNIVLRRTKIGRAADLALPPRIVSLRRDCLDIKEQDYYESLYNESQAQ 615

Query: 183 FNTYVEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPTAA 305
           FNTY+EANTLMNNYAHIFDLLTRLRQAVDHPYLVVYS +AA
Sbjct: 616 FNTYIEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSQSAA 656


>ref|XP_002269303.2| PREDICTED: ATP-dependent helicase rhp16-like [Vitis vinifera]
          Length = 989

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/100 (78%), Positives = 84/100 (84%)
 Frame = +3

Query: 3   RRAMXXXXXXXXXXXXXRRTKIGRAADLALPPRIVSLRRDSLDMKEQDYYESLYNESQAQ 182
           +RAM             RRTK GRAADLALPPRIVSLRRD+LD+KE+DYY+SLYNESQAQ
Sbjct: 619 QRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLYNESQAQ 678

Query: 183 FNTYVEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPTA 302
           FNTYVEA TLMNNYAHIFDLLTRLRQAVDHPYLVVYS T+
Sbjct: 679 FNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTS 718


>emb|CBI28814.3| unnamed protein product [Vitis vinifera]
          Length = 964

 Score =  154 bits (390), Expect = 5e-36
 Identities = 78/100 (78%), Positives = 84/100 (84%)
 Frame = +3

Query: 3   RRAMXXXXXXXXXXXXXRRTKIGRAADLALPPRIVSLRRDSLDMKEQDYYESLYNESQAQ 182
           +RAM             RRTK GRAADLALPPRIVSLRRD+LD+KE+DYY+SLYNESQAQ
Sbjct: 594 QRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLYNESQAQ 653

Query: 183 FNTYVEANTLMNNYAHIFDLLTRLRQAVDHPYLVVYSPTA 302
           FNTYVEA TLMNNYAHIFDLLTRLRQAVDHPYLVVYS T+
Sbjct: 654 FNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTS 693


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