BLASTX nr result

ID: Glycyrrhiza23_contig00032260 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032260
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817...   155   2e-36
gb|AFK36249.1| unknown [Lotus japonicus]                              127   1e-27
ref|XP_003624721.1| Transcription factor IIIB 90 kDa subunit [Me...   109   2e-22
ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa ...   106   2e-21
ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa ...   106   2e-21

>ref|XP_003548453.1| PREDICTED: uncharacterized protein LOC100817609 [Glycine max]
          Length = 604

 Score =  155 bits (393), Expect = 2e-36
 Identities = 72/101 (71%), Positives = 86/101 (85%)
 Frame = -1

Query: 316 MVYCDHCWKNVSGVLVDDGPLCCSECGKVLEDFHFSQEPTFVKNSAGQSKLSGTYVRTIQ 137
           MVYC HC KNV+G  +DDG LCC  CG+VLED+ F++EP+FVKN+AGQSKLSG YVRT+Q
Sbjct: 1   MVYCSHCAKNVAGERLDDGFLCCGSCGRVLEDYFFAEEPSFVKNAAGQSKLSGNYVRTVQ 60

Query: 136 SELSASRQRTLDRAYDDIKFLSSNLGVNDDNVANQALGFYK 14
           SE S SRQRTLDRAYD+IK+LS  LGVND+++A QAL FYK
Sbjct: 61  SEYSESRQRTLDRAYDEIKYLSFGLGVNDEHMAEQALTFYK 101


>gb|AFK36249.1| unknown [Lotus japonicus]
          Length = 121

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/102 (65%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = -1

Query: 316 MVYCDHCWKNVSGVLVDDGP-LCCSECGKVLEDFHFSQEPTFVKNSAGQSKLSGTYVRTI 140
           MV+CD+C KNV+GV ++DG  LCC ECGKVLE+ +FS+E    K S GQS+LSG YVRTI
Sbjct: 1   MVFCDNCVKNVAGVRINDGLILCCDECGKVLENNYFSEE----KISTGQSELSGRYVRTI 56

Query: 139 QSELSASRQRTLDRAYDDIKFLSSNLGVNDDNVANQALGFYK 14
           QSE SASRQRTLDR YD+IK+LS    ++DDN+ANQAL FY+
Sbjct: 57  QSEYSASRQRTLDRDYDEIKYLS----LDDDNLANQALAFYR 94


>ref|XP_003624721.1| Transcription factor IIIB 90 kDa subunit [Medicago truncatula]
           gi|355499736|gb|AES80939.1| Transcription factor IIIB 90
           kDa subunit [Medicago truncatula]
          Length = 608

 Score =  109 bits (273), Expect = 2e-22
 Identities = 55/101 (54%), Positives = 74/101 (73%)
 Frame = -1

Query: 316 MVYCDHCWKNVSGVLVDDGPLCCSECGKVLEDFHFSQEPTFVKNSAGQSKLSGTYVRTIQ 137
           MVYCDHC KNV   L ++  L C+ CGKVLED   ++EPTF KNSAGQSK+SG  V+ ++
Sbjct: 1   MVYCDHCVKNVRAELHEECYLVCTSCGKVLEDQILTEEPTFTKNSAGQSKISGNLVKAVE 60

Query: 136 SELSASRQRTLDRAYDDIKFLSSNLGVNDDNVANQALGFYK 14
            EL ASR+RTL RA  ++++LS +LGV++ +V  QA  FY+
Sbjct: 61  -ELDASRKRTLYRASKEMEYLSLSLGVSEGDVVRQARAFYE 100


>ref|XP_004157302.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 663

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/102 (49%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = -1

Query: 316 MVYCDHCWKNVSGVLVDDGPLCCSECGKVLEDFHFSQEPTFVKNSAGQSKLSGTYVRTIQ 137
           MV+C +C KNV+G   + G L C  CGKVL+ ++FSQEPTF K+S GQS+LSG +VR+IQ
Sbjct: 1   MVWCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 136 SELSASRQRTLDRAYDDIKFLSSNLGVND-DNVANQALGFYK 14
           S  SASR+RTL++A++D++++ + L + + D +   A  FY+
Sbjct: 61  SNYSASRERTLNKAFEDMRYMRNGLNMGESDEIIRVAGAFYR 102


>ref|XP_004135795.1| PREDICTED: transcription factor IIIB 60 kDa subunit-like [Cucumis
           sativus]
          Length = 643

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/102 (49%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
 Frame = -1

Query: 316 MVYCDHCWKNVSGVLVDDGPLCCSECGKVLEDFHFSQEPTFVKNSAGQSKLSGTYVRTIQ 137
           MV+C +C KNV+G   + G L C  CGKVL+ ++FSQEPTF K+S GQS+LSG +VR+IQ
Sbjct: 1   MVWCSNCVKNVAGSRDEAGFLYCDMCGKVLDSYNFSQEPTFTKDSGGQSQLSGNFVRSIQ 60

Query: 136 SELSASRQRTLDRAYDDIKFLSSNLGVND-DNVANQALGFYK 14
           S  SASR+RTL++A++D++++ + L + + D +   A  FY+
Sbjct: 61  SNYSASRERTLNKAFEDMRYMRNGLNMGESDEIIRVAGAFYR 102


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