BLASTX nr result
ID: Glycyrrhiza23_contig00032244
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00032244
(298 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi... 169 3e-40
ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|2... 153 2e-35
ref|XP_002523547.1| pentatricopeptide repeat-containing protein,... 140 1e-31
emb|CBI35582.3| unnamed protein product [Vitis vinifera] 137 7e-31
emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera] 137 7e-31
>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 169 bits (427), Expect = 3e-40
Identities = 83/99 (83%), Positives = 90/99 (90%)
Frame = +1
Query: 1 SCVASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPA 180
S +ASTIF+KMG RNIVSWNAM+AN+A+NRLE AVELVRQMQA GE PNN+TFTNVLPA
Sbjct: 393 SRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPA 452
Query: 181 CARLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
CARLGFLNVGKEIHARIIRVG + DLFVSN LTDMYSKC
Sbjct: 453 CARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKC 491
Score = 77.0 bits (188), Expect = 1e-12
Identities = 31/92 (33%), Positives = 60/92 (65%)
Frame = +1
Query: 19 IFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGF 198
+FD++ +RN++SWNA++ +++ + A+++ R M G PN++T +++LP LG
Sbjct: 298 VFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGL 357
Query: 199 LNVGKEIHARIIRVGYAFDLFVSNTLTDMYSK 294
+G E+H +++ D+F+SN+L DMY+K
Sbjct: 358 FKLGMEVHGFSLKMAIESDVFISNSLIDMYAK 389
Score = 67.4 bits (163), Expect = 1e-09
Identities = 32/97 (32%), Positives = 60/97 (61%)
Frame = +1
Query: 7 VASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACA 186
+A +F+ + R+ VS+N ++ Y++ + ++ L +M+ G P+ ++F V+ ACA
Sbjct: 496 LAQNVFN-ISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACA 554
Query: 187 RLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
L F+ GKEIH ++R + LFV+N+L D+Y++C
Sbjct: 555 NLAFIRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRC 591
>ref|XP_002313273.1| predicted protein [Populus trichocarpa] gi|222849681|gb|EEE87228.1|
predicted protein [Populus trichocarpa]
Length = 680
Score = 153 bits (386), Expect = 2e-35
Identities = 73/99 (73%), Positives = 87/99 (87%)
Frame = +1
Query: 1 SCVASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPA 180
S AS +F+++G++NIVSWNAMVAN+AQNRLE+AAV+LVRQMQA GE PN++TFTNVLPA
Sbjct: 261 SLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPA 320
Query: 181 CARLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
CAR+GFL GKEIHAR IR G + DLFVSN LTDMY+KC
Sbjct: 321 CARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKC 359
Score = 79.0 bits (193), Expect = 4e-13
Identities = 38/92 (41%), Positives = 57/92 (61%)
Frame = +1
Query: 19 IFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGF 198
+FD++ +RN VSWNA++ + A A+E+ R M G PN++TF+++LP L
Sbjct: 166 VFDEISERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKL 225
Query: 199 LNVGKEIHARIIRVGYAFDLFVSNTLTDMYSK 294
+ GKEIH +R G D+FV+N L DMY+K
Sbjct: 226 FDFGKEIHGFSLRFGLESDIFVANALIDMYAK 257
Score = 65.9 bits (159), Expect = 3e-09
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Frame = +1
Query: 19 IFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAH-GENPNNMTFTNVLPACARLG 195
+FD+M +R++VSWN+++ ++ + A+ L +M G PN ++ +VLP CA L
Sbjct: 64 VFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLE 123
Query: 196 FLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
G++IH +++ G + V N L D+Y KC
Sbjct: 124 DGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKC 157
Score = 55.1 bits (131), Expect = 6e-06
Identities = 29/90 (32%), Positives = 47/90 (52%)
Frame = +1
Query: 28 KMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGFLNV 207
K+ R+ VS+N ++ Y+Q ++ L +M G + +++ V+ ACA L L
Sbjct: 370 KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQ 429
Query: 208 GKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
GKE+H +R LF++N L D Y KC
Sbjct: 430 GKEVHGLAVRKHLHTHLFIANALLDFYIKC 459
>ref|XP_002523547.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537254|gb|EEF38886.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 555
Score = 140 bits (352), Expect = 1e-31
Identities = 67/99 (67%), Positives = 78/99 (78%)
Frame = +1
Query: 1 SCVASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPA 180
S AS +F M ++N+VSWNAMVAN+AQNR E+AA+ELVRQMQ G PN +TFTN LPA
Sbjct: 264 STQASVVFHLMTEKNVVSWNAMVANFAQNRFELAAIELVRQMQTDGAIPNPVTFTNALPA 323
Query: 181 CARLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
CAR+GFL GKEIHAR R+G FD FVSN LTDMY+KC
Sbjct: 324 CARMGFLRPGKEIHARAFRMGCYFDQFVSNALTDMYAKC 362
Score = 75.5 bits (184), Expect = 4e-12
Identities = 37/92 (40%), Positives = 55/92 (59%)
Frame = +1
Query: 19 IFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGF 198
+FD+M +RN VSWNA++ + A A+E R M PN++T ++LP L
Sbjct: 169 VFDEMMERNEVSWNAIITSLAYMEHNKDALEAFRLMINEEVKPNSVTIASILPVLVELEH 228
Query: 199 LNVGKEIHARIIRVGYAFDLFVSNTLTDMYSK 294
++GKEIH +R G D+F+SN+L DMY+K
Sbjct: 229 FDLGKEIHGFSLRFGIESDVFISNSLIDMYAK 260
Score = 70.5 bits (171), Expect = 1e-10
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 1/97 (1%)
Frame = +1
Query: 10 ASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAH-GENPNNMTFTNVLPACA 186
A +FD+M +R++VSWN ++ ++ N + A++L +M G PN +T +VLP CA
Sbjct: 64 AKKVFDEMLERDVVSWNTLLGAFSVNGFYLKALDLFYEMNLRSGFRPNMVTVVSVLPVCA 123
Query: 187 RLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
L V EIH ++++G + + N L D+Y KC
Sbjct: 124 ALEDEVVASEIHCYVVKIGLDSQVTLCNALVDVYGKC 160
Score = 58.5 bits (140), Expect = 5e-07
Identities = 28/86 (32%), Positives = 49/86 (56%)
Frame = +1
Query: 40 RNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGFLNVGKEI 219
R+ VS+N ++ Y+Q ++ L +M G + +++ V+ ACA L L G+EI
Sbjct: 377 RDEVSYNILIVGYSQTTNSSESLSLFLEMGLVGMERDVVSYMGVIAACASLVALKQGEEI 436
Query: 220 HARIIRVGYAFDLFVSNTLTDMYSKC 297
HA ++R +F++N+L D Y+KC
Sbjct: 437 HALVVRKNLHMHIFIANSLLDFYTKC 462
>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 137 bits (346), Expect = 7e-31
Identities = 66/98 (67%), Positives = 80/98 (81%)
Frame = +1
Query: 1 SCVASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPA 180
S AS +F K+ +N+VSWNAM+AN+AQNR E+ AV LVRQMQ +GE PN++TFTNVLPA
Sbjct: 194 STEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPA 253
Query: 181 CARLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSK 294
CAR+G + GKEIHAR I +G AFDLFVSN LTDMY+K
Sbjct: 254 CARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAK 291
Score = 76.6 bits (187), Expect = 2e-12
Identities = 35/96 (36%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +1
Query: 10 ASTIFDKMGDRNIVSWNAMVANYAQNRLEVA-AVELVRQMQAHGENPNNMTFTNVLPACA 186
A +FD+M ++++VSWN M+ ++ N A+++ R M G PN++T ++ LP
Sbjct: 95 AGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLV 154
Query: 187 RLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSK 294
L F G+E+H IR+G D+F++N+L DMY+K
Sbjct: 155 ELEFFKAGREVHGSSIRMGLESDIFIANSLIDMYAK 190
Score = 62.8 bits (151), Expect = 3e-08
Identities = 34/97 (35%), Positives = 55/97 (56%)
Frame = +1
Query: 7 VASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACA 186
+A +FD R+ VS+N ++ ++Q ++ L +MQ G +N++F L ACA
Sbjct: 297 LARNVFDT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACA 355
Query: 187 RLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
L + GKEIH ++R + LFV+N+L D Y+KC
Sbjct: 356 NLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKC 392
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +1
Query: 55 WNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGFLNVGKEIHARII 234
WN ++ Y+ + +E+ QM G P++ TF VL ACA + G+E+H ++
Sbjct: 10 WNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSVV 68
Query: 235 RVGYAFDLFVSNTLTDMYSKC 297
++G+ D+FV NTL Y C
Sbjct: 69 KLGFESDVFVGNTLLSFYGNC 89
>emb|CAN64573.1| hypothetical protein VITISV_010383 [Vitis vinifera]
Length = 672
Score = 137 bits (346), Expect = 7e-31
Identities = 66/98 (67%), Positives = 80/98 (81%)
Frame = +1
Query: 1 SCVASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPA 180
S AS +F K+ +N+VSWNAM+AN+AQNR E+ AV LVRQMQ +GE PN++TFTNVLPA
Sbjct: 295 STEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTFTNVLPA 354
Query: 181 CARLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSK 294
CAR+G + GKEIHAR I +G AFDLFVSN LTDMY+K
Sbjct: 355 CARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAK 392
Score = 75.9 bits (185), Expect = 3e-12
Identities = 33/92 (35%), Positives = 57/92 (61%)
Frame = +1
Query: 19 IFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGF 198
+F +M ++N+VSWNA++ ++ A+++ R M G PN++T ++ LP L F
Sbjct: 200 VFGEMVEKNLVSWNAIITSFGYKGHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEF 259
Query: 199 LNVGKEIHARIIRVGYAFDLFVSNTLTDMYSK 294
G+E+H IR+G D+F++N+L DMY+K
Sbjct: 260 FKAGREVHGSSIRMGLESDIFIANSLIDMYAK 291
Score = 69.3 bits (168), Expect = 3e-10
Identities = 33/97 (34%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +1
Query: 10 ASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAH-GENPNNMTFTNVLPACA 186
A +FD+M ++++VSWN M+ ++ N ++L +M+ G PN ++ +VLP CA
Sbjct: 95 AGRVFDEMPEKDLVSWNTMIGVFSVNGCWXEVLDLFGEMRLRSGLRPNVVSVVSVLPVCA 154
Query: 187 RLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
+ EIH +++VG F + V N L D+Y KC
Sbjct: 155 GVEDEVTASEIHGYVVKVGLEFQVIVGNALLDVYGKC 191
Score = 61.6 bits (148), Expect = 6e-08
Identities = 34/97 (35%), Positives = 54/97 (55%)
Frame = +1
Query: 7 VASTIFDKMGDRNIVSWNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACA 186
+A +FD R+ VS+N ++ +Q ++ L +MQ G +N++F L ACA
Sbjct: 398 LARNVFDT-SLRDEVSYNILIVGXSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACA 456
Query: 187 RLGFLNVGKEIHARIIRVGYAFDLFVSNTLTDMYSKC 297
L + GKEIH ++R + LFV+N+L D Y+KC
Sbjct: 457 NLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKC 493
Score = 57.0 bits (136), Expect = 2e-06
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +1
Query: 55 WNAMVANYAQNRLEVAAVELVRQMQAHGENPNNMTFTNVLPACARLGFLNVGKEIHARII 234
WN ++ Y+ + +E+ QM G P++ TF VL ACA + G+E+H ++
Sbjct: 10 WNTLIRGYSIAGVG-GGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGXVV 68
Query: 235 RVGYAFDLFVSNTLTDMYSKC 297
++G+ D+FV NTL Y C
Sbjct: 69 KLGFESDVFVGNTLLSFYGNC 89