BLASTX nr result

ID: Glycyrrhiza23_contig00032198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032198
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003637624.1| Methyl binding domain protein [Medicago trun...    84   9e-15
ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-contain...    59   4e-07
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...    59   5e-07

>ref|XP_003637624.1| Methyl binding domain protein [Medicago truncatula]
           gi|355503559|gb|AES84762.1| Methyl binding domain
           protein [Medicago truncatula]
          Length = 240

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/64 (71%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
 Frame = -1

Query: 191 ELTDSTGGDRNLNAPPPPQQHQQ-DSRSGLGIDLNEIPSPSSSFAETLPDSAIDIVRAYH 15
           ELTDST    NL  PPP Q  QQ D+RS L IDLNEIPSPSSSF ETLPD  +DIVR YH
Sbjct: 3   ELTDSTAAGNNL--PPPQQPPQQIDTRSILCIDLNEIPSPSSSFVETLPDFTVDIVRTYH 60

Query: 14  ENPA 3
           ENPA
Sbjct: 61  ENPA 64


>ref|XP_004158345.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 1028

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
 Frame = -1

Query: 197 IMELTDSTGGDRNLNAPPPPQQHQQDSRSG--LGIDLNEIPSPSSSFAETLPDSAIDIVR 24
           +MEL DS+     LN  P P      S +G  +GIDLNEIPSPSS F+ETL DS  D+VR
Sbjct: 111 MMELADSSDEHPQLNHLPNPTDSTTRSATGTGIGIDLNEIPSPSS-FSETLSDS-FDVVR 168

Query: 23  AYHENP 6
            +H+NP
Sbjct: 169 TFHDNP 174


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
           [Cucumis sativus]
          Length = 2131

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
 Frame = -1

Query: 194 MELTDSTGGDRNLNAPPPPQQHQQDSRSG--LGIDLNEIPSPSSSFAETLPDSAIDIVRA 21
           MEL DS+     LN  P P      S +G  +GIDLNEIPSPSS F+ETL DS  D+VR 
Sbjct: 1   MELADSSDEHPQLNHLPNPTDSTTRSATGTGIGIDLNEIPSPSS-FSETLSDS-FDVVRT 58

Query: 20  YHENP 6
           +H+NP
Sbjct: 59  FHDNP 63


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