BLASTX nr result

ID: Glycyrrhiza23_contig00032192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032192
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]...   352   4e-95
ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-...   333   2e-89
ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-...   318   8e-85
ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|...   221   1e-55
emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]   218   1e-54

>ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
            gi|355483599|gb|AES64802.1| Endoribonuclease Dicer
            [Medicago truncatula]
          Length = 1418

 Score =  352 bits (904), Expect = 4e-95
 Identities = 172/249 (69%), Positives = 197/249 (79%)
 Frame = -1

Query: 750  GMLYLPKSCPLQAIQVQGDKKILKNIACLEACKQLHKIGALTDNLVPXXXXXXXXXXELG 571
            G+LYLPKSCP+ AI VQGD K LKNIACLEACKQLHKIGALTDNLVP          E G
Sbjct: 626  GILYLPKSCPIHAIHVQGDNKFLKNIACLEACKQLHKIGALTDNLVPSIVVEEAEVEEFG 685

Query: 570  NKPYDEEQPSYVPSELVNHVSKNSKTIYHCYLIELKQNFSYDITVQDIFLATRVELDPEI 391
            N+PY EEQPSYVP ELVNH+S NS TIY+CYLIELKQNFSYDITVQDIFLATRVELDPEI
Sbjct: 686  NEPYSEEQPSYVPFELVNHMSNNSSTIYYCYLIELKQNFSYDITVQDIFLATRVELDPEI 745

Query: 390  GCMQFDMCFDRGSLSVDLRYKGTMNLSPDQVILCKRFQVTLLRILLDHKMDKLTTVVDKY 211
            GCMQFDMCFDRGSL+V+LRY+G +NLSPDQV+LCKRFQV++L IL++ KMDK  +  +KY
Sbjct: 746  GCMQFDMCFDRGSLAVNLRYRGNINLSPDQVLLCKRFQVSILGILMNSKMDK-ESFSEKY 804

Query: 210  CXXXXXXXXXXXLPAIAKHKIPVVDWLVINSVNPSNVACEHHVTNIQTQKGRVCTCILQN 31
                        LP+IA  + P VDWL I+S++PS + C +H  NI T+KG  C CIL+N
Sbjct: 805  SLEDDLEIDYLLLPSIAIEETPSVDWLTISSIHPSKIQCRYHAANILTEKGFACGCILRN 864

Query: 30   ALICTPHNG 4
            ALICTPHNG
Sbjct: 865  ALICTPHNG 873


>ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1414

 Score =  333 bits (854), Expect = 2e-89
 Identities = 159/247 (64%), Positives = 192/247 (77%)
 Frame = -1

Query: 750  GMLYLPKSCPLQAIQVQGDKKILKNIACLEACKQLHKIGALTDNLVPXXXXXXXXXXELG 571
            G LYLPKSCPLQ I+V+GDKKILKNIACLEACKQLHKIGAL+DNLVP          ELG
Sbjct: 591  GTLYLPKSCPLQPIRVEGDKKILKNIACLEACKQLHKIGALSDNLVPDIVMEEAEVEELG 650

Query: 570  NKPYDEEQPSYVPSELVNHVSKNSKTIYHCYLIELKQNFSYDITVQDIFLATRVELDPEI 391
            N+PYDE QP++VP  LVN VS NS+T+YHCY +E    FSYD++VQDIFL  R+ELDPEI
Sbjct: 651  NEPYDENQPTFVPFGLVNSVSNNSQTVYHCYFMEFNNKFSYDVSVQDIFLLMRIELDPEI 710

Query: 390  GCMQFDMCFDRGSLSVDLRYKGTMNLSPDQVILCKRFQVTLLRILLDHKMDKLTTVVDKY 211
            GCMQFDM FDRGSLSV+ RYKGT+NLSPDQV+LCK+FQVT+LRIL+DH M+KLT  +D+ 
Sbjct: 711  GCMQFDMGFDRGSLSVNFRYKGTINLSPDQVLLCKKFQVTILRILIDHDMNKLTAGLDRC 770

Query: 210  CXXXXXXXXXXXLPAIAKHKIPVVDWLVINSVNPSNVACEHHVTNIQTQKGRVCTCILQN 31
                        LPA+ K K   ++WL +NSVNPS V+C++H  +I+T+ G VC+C LQN
Sbjct: 771  YLEDDLEIDYLLLPAMGKGKYTAINWLAVNSVNPSEVSCKYHEPHIRTKSGLVCSCKLQN 830

Query: 30   ALICTPH 10
            AL+CT H
Sbjct: 831  ALVCTSH 837


>ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
          Length = 1421

 Score =  318 bits (815), Expect = 8e-85
 Identities = 159/249 (63%), Positives = 187/249 (75%)
 Frame = -1

Query: 750  GMLYLPKSCPLQAIQVQGDKKILKNIACLEACKQLHKIGALTDNLVPXXXXXXXXXXELG 571
            G LYLPKSCPLQ I V+G+KK LKNIACLEACKQLHKIGALTDNLVP          E G
Sbjct: 624  GTLYLPKSCPLQPICVEGNKKHLKNIACLEACKQLHKIGALTDNLVPDIVIEEAEVEEFG 683

Query: 570  NKPYDEEQPSYVPSELVNHVSKNSKTIYHCYLIELKQNFSYDITVQDIFLATRVELDPEI 391
            N+PYDE QP++VP  LVN VS NS TIYHCYL+EL QNFSYDI+VQDIFLA R+ELDPEI
Sbjct: 684  NEPYDENQPTFVPFGLVNSVSNNSHTIYHCYLMELSQNFSYDISVQDIFLAIRIELDPEI 743

Query: 390  GCMQFDMCFDRGSLSVDLRYKGTMNLSPDQVILCKRFQVTLLRILLDHKMDKLTTVVDKY 211
            GC QFDM FDRGS+S+ LRYKGT+NLSP+ V+LCK+FQVTLL  ++DH M+KL T +DK 
Sbjct: 744  GCTQFDMGFDRGSVSLKLRYKGTINLSPNLVLLCKKFQVTLLGSIIDHSMNKLATSLDKC 803

Query: 210  CXXXXXXXXXXXLPAIAKHKIPVVDWLVINSVNPSNVACEHHVTNIQTQKGRVCTCILQN 31
                        LPAI K +   V+WL I SV PS+  C++H  +I+T+ G VCTC LQ+
Sbjct: 804  YLEDNVEIDYLLLPAIGKGEKSHVNWLAIKSVEPSSFTCKYHQPHIETKSGLVCTCKLQD 863

Query: 30   ALICTPHNG 4
            AL+CT H G
Sbjct: 864  ALVCTSHPG 872


>ref|XP_002312197.1| dicer-like protein [Populus trichocarpa] gi|222852017|gb|EEE89564.1|
            dicer-like protein [Populus trichocarpa]
          Length = 1468

 Score =  221 bits (564), Expect = 1e-55
 Identities = 122/257 (47%), Positives = 162/257 (63%), Gaps = 10/257 (3%)
 Frame = -1

Query: 744  LYLPKSCPLQAIQVQGDKKILKNIACLEACKQLHKIGALTDNLVPXXXXXXXXXXELGNK 565
            L+LPKS P+Q I VQG+ K LK  ACLEACK+LH  GALTDNLVP          ++GN+
Sbjct: 644  LHLPKSSPVQTICVQGNIKTLKQKACLEACKKLHVSGALTDNLVPDIVMEEAVAEDVGNE 703

Query: 564  PYDEEQPSYVPSELVNHVSKNSKTIYHCYLIELKQNFSYDITVQDIFLATRVELDPE-IG 388
             YD+EQP Y+P ELV+   +N KT Y+CYLIEL QNF+YDI V D+ L  R EL+ + I 
Sbjct: 704  RYDDEQPIYLPPELVSRGPRNLKTKYYCYLIELNQNFAYDIPVHDVVLVVRTELESDVIR 763

Query: 387  CMQFDMCFDRGSLSVDLRYKGTMNLSPDQVILCKRFQVTLLRILLDHKMDKLTTVVDKYC 208
             M FD+  +RG L+V+LRY G ++L    V+LC+RFQ+TL ++LLDH ++KL  V++   
Sbjct: 764  SMGFDLEAERGLLTVNLRYIGDIDLERVLVLLCRRFQITLFKVLLDHSVNKLKEVLEGLD 823

Query: 207  XXXXXXXXXXXLPAIAKHKIPVVDWLVINSV-----NPSNVACEH----HVTNIQTQKGR 55
                       LPA      P ++W  I+SV     N  +  C      HV  +QT+ G 
Sbjct: 824  LGSGAEIDYFLLPAFRSCSQPSINWAPISSVLFSYKNEEHFNCSRNGNAHV--VQTKCGP 881

Query: 54   VCTCILQNALICTPHNG 4
            VC C+LQN+L+CTPHNG
Sbjct: 882  VCACVLQNSLVCTPHNG 898


>emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
          Length = 1296

 Score =  218 bits (555), Expect = 1e-54
 Identities = 110/250 (44%), Positives = 161/250 (64%), Gaps = 5/250 (2%)
 Frame = -1

Query: 744  LYLPKSCPLQAIQVQGDKKILKNIACLEACKQLHKIGALTDNLVPXXXXXXXXXXELGNK 565
            +YLPKSCP+Q + V+G+ K LK IACLEACK+LHK GALTDNLVP          +  N 
Sbjct: 497  IYLPKSCPIQTVSVRGNIKTLKQIACLEACKELHKAGALTDNLVPQIVEEEAIVAQDENM 556

Query: 564  PYDEEQPSYVPSELVNHVSKNSKTIYHCYLIELKQNFSYDITVQDIFLATRVELDPEIGC 385
            PYD+EQ +Y P EL+N   K+  T YHCYLIEL Q + Y+++ Q I LA R EL+ ++G 
Sbjct: 557  PYDDEQATYYPPELINPSLKDPVTPYHCYLIELBQKYEYEVSPQGIVLAVRSELEYDVGN 616

Query: 384  MQFDMCFDRGSLSVDLRYKGTMNLSPDQVILCKRFQVTLLRILLDHKMDKLTTVVDKYCX 205
            + FD+  DRG+++V + Y G ++L+ +QV++C++FQ+TLLR+L+D  +DK   V D+Y  
Sbjct: 617  VNFDLQVDRGTMTVSMNYVGVIHLTAEQVLMCRKFQITLLRVLIDRAIDK--GVFDRYDL 674

Query: 204  XXXXXXXXXXLPAIAKHKIP-VVDWLVINSVNPSNVACEHHV----TNIQTQKGRVCTCI 40
                      LP+    +IP +VDW  + SV  S+    +H+      + T+ G VC+C 
Sbjct: 675  GNDQMVDYLMLPSTNSREIPSIVDWKCLGSVFFSHENASNHMGCFFPRMHTKSGFVCSCT 734

Query: 39   LQNALICTPH 10
            L+N+++ TPH
Sbjct: 735  LKNSIVYTPH 744


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