BLASTX nr result
ID: Glycyrrhiza23_contig00032157
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00032157
(375 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula] g... 238 5e-61
ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containi... 228 3e-58
ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containi... 214 5e-54
emb|CBI36158.3| unnamed protein product [Vitis vinifera] 214 5e-54
ref|XP_002299640.1| predicted protein [Populus trichocarpa] gi|2... 200 9e-50
>ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase
[Medicago truncatula] gi|355486835|gb|AES68038.1|
Pentatricopeptide repeat-containing protein [Medicago
truncatula]
Length = 639
Score = 238 bits (606), Expect = 5e-61
Identities = 114/124 (91%), Positives = 119/124 (95%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPT 194
LDENRLVGELW+TIQDMVKS CAIGP+ELSEIVKILG+VKMVNKALS+FYQVKGRKCRPT
Sbjct: 135 LDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRPT 194
Query: 193 ASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLF 14
A TYNSVI MLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAF KLNRDDSA+ LF
Sbjct: 195 AGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRLF 254
Query: 13 DEMK 2
DEMK
Sbjct: 255 DEMK 258
Score = 60.8 bits (146), Expect = 1e-07
Identities = 33/123 (26%), Positives = 61/123 (49%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPT 194
L ++ V + + ++M+K C ++ ++ ILG+ + +A+ +F +++ C P
Sbjct: 311 LGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPN 370
Query: 193 ASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLF 14
TYN++I L ++ + E + P + TYS LI F K NR + AL L
Sbjct: 371 VVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLL 430
Query: 13 DEM 5
+EM
Sbjct: 431 EEM 433
Score = 55.1 bits (131), Expect = 6e-06
Identities = 30/93 (32%), Positives = 53/93 (56%)
Frame = -3
Query: 280 IVKILGKVKMVNKALSVFYQVKGRKCRPTASTYNSVIFMLMQEGHHEKVHELYNEMCSEG 101
++ I K+ V +AL++ ++++ R+C PT TY +I L + G E + +Y M +G
Sbjct: 272 LMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDG 331
Query: 100 HCFPDTVTYSALISAFAKLNRDDSALSLFDEMK 2
C PD V + LI+ + +R A+ LF+EM+
Sbjct: 332 -CKPDVVLMNNLINILGRSDRLKEAVELFEEMR 363
>ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 228 bits (582), Expect = 3e-58
Identities = 109/124 (87%), Positives = 117/124 (94%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPT 194
LDE+R+ GE+WKTIQDMVK SCA+ PAELSEIV+ILGK KMVN+ALSVFYQVKGRKCRPT
Sbjct: 128 LDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVFYQVKGRKCRPT 187
Query: 193 ASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLF 14
ASTYNS+I MLMQEGHHEKVHELYNEMCSE HCFPDTVTYSALISAFAKLNRDDSA+ LF
Sbjct: 188 ASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLF 247
Query: 13 DEMK 2
DEMK
Sbjct: 248 DEMK 251
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/123 (27%), Positives = 60/123 (48%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPT 194
L ++ V + + T ++M+K C ++ ++ ILG+ + A+ +F ++K C P
Sbjct: 304 LGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEMKLLNCAPN 363
Query: 193 ASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLF 14
TYN++I L + + E + P + TYS LI + K NR + AL L
Sbjct: 364 VVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEKALLLL 423
Query: 13 DEM 5
+EM
Sbjct: 424 EEM 426
>ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 214 bits (546), Expect = 5e-54
Identities = 98/124 (79%), Positives = 115/124 (92%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPT 194
LDE ++GE+WKTIQ+MV+S+C IGPA+LSEIVK+LGK KMVNKALS+FYQ+KGRKC+PT
Sbjct: 134 LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT 193
Query: 193 ASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLF 14
++TYNS+I MLMQEGHHEKVHELYNEMC+EG C PDTVTYSALI+AF KL RDDSA+SLF
Sbjct: 194 SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLF 253
Query: 13 DEMK 2
DEMK
Sbjct: 254 DEMK 257
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/117 (30%), Positives = 57/117 (48%)
Frame = -3
Query: 355 VGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPTASTYNS 176
V E + +M+K C ++ ++ +LGK + A+ +F +++ +C P TYN+
Sbjct: 316 VEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNT 375
Query: 175 VIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLFDEM 5
VI L + L+ E E P + TYS LI F K NR + AL L +EM
Sbjct: 376 VIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM 432
Score = 55.5 bits (132), Expect = 5e-06
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = -3
Query: 334 IQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPTASTYNSVIFMLMQ 155
+Q+M + CA+ +E++K +GK V +A S+F + C+P N++I +L +
Sbjct: 288 VQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGK 347
Query: 154 EGHHEKVHELYNEMCSEGHCFPDTVTYSALISA-FAKLNRDDSALSLFDEMK 2
G +L+ EM S C P+ VTY+ +I A F R A +++MK
Sbjct: 348 AGRLADAIKLFEEMESL-QCTPNVVTYNTVIKALFESKARASEAFLWYEKMK 398
>emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 214 bits (546), Expect = 5e-54
Identities = 98/124 (79%), Positives = 115/124 (92%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPT 194
LDE ++GE+WKTIQ+MV+S+C IGPA+LSEIVK+LGK KMVNKALS+FYQ+KGRKC+PT
Sbjct: 134 LDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCKPT 193
Query: 193 ASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLF 14
++TYNS+I MLMQEGHHEKVHELYNEMC+EG C PDTVTYSALI+AF KL RDDSA+SLF
Sbjct: 194 SNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLF 253
Query: 13 DEMK 2
DEMK
Sbjct: 254 DEMK 257
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/117 (30%), Positives = 57/117 (48%)
Frame = -3
Query: 355 VGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPTASTYNS 176
V E + +M+K C ++ ++ +LGK + A+ +F +++ +C P TYN+
Sbjct: 316 VEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNT 375
Query: 175 VIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLFDEM 5
VI L + L+ E E P + TYS LI F K NR + AL L +EM
Sbjct: 376 VIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM 432
Score = 55.5 bits (132), Expect = 5e-06
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Frame = -3
Query: 334 IQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPTASTYNSVIFMLMQ 155
+Q+M + CA+ +E++K +GK V +A S+F + C+P N++I +L +
Sbjct: 288 VQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGK 347
Query: 154 EGHHEKVHELYNEMCSEGHCFPDTVTYSALISA-FAKLNRDDSALSLFDEMK 2
G +L+ EM S C P+ VTY+ +I A F R A +++MK
Sbjct: 348 AGRLADAIKLFEEMESL-QCTPNVVTYNTVIKALFESKARASEAFLWYEKMK 398
>ref|XP_002299640.1| predicted protein [Populus trichocarpa] gi|222846898|gb|EEE84445.1|
predicted protein [Populus trichocarpa]
Length = 609
Score = 200 bits (509), Expect = 9e-50
Identities = 94/125 (75%), Positives = 110/125 (88%), Gaps = 1/125 (0%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKS-SCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRP 197
LD+ L GE+WK IQ+MV+S +C IGPA+LSE+VKILGK KMVNKALSVFYQ+K RKC+P
Sbjct: 105 LDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCKP 164
Query: 196 TASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSL 17
TASTYNS+I MLMQEGHHEK+HELY+EMC+EG CFPDT+TYS L+SAF KL RDD A+ L
Sbjct: 165 TASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYAIRL 224
Query: 16 FDEMK 2
FDEMK
Sbjct: 225 FDEMK 229
Score = 63.9 bits (154), Expect = 1e-08
Identities = 37/123 (30%), Positives = 57/123 (46%)
Frame = -3
Query: 373 LDENRLVGELWKTIQDMVKSSCAIGPAELSEIVKILGKVKMVNKALSVFYQVKGRKCRPT 194
L ++ V + + +M+K C ++ ++ I GK + AL +F Q++ KC P
Sbjct: 281 LGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAPN 340
Query: 193 ASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFAKLNRDDSALSLF 14
TYN+VI L + + E P + TYS LI F K NR + AL L
Sbjct: 341 VVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLL 400
Query: 13 DEM 5
+EM
Sbjct: 401 EEM 403
Score = 56.2 bits (134), Expect = 3e-06
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = -3
Query: 244 KALSVFYQVKGRKCRPTASTYNSVIFMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSAL 65
KAL + ++K + C PT TY +I L + G E + ++ M +G C PD V + L
Sbjct: 254 KALGLVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDG-CKPDVVLINNL 312
Query: 64 ISAFAKLNRDDSALSLFDEMK 2
I+ F K R + AL LFD+M+
Sbjct: 313 INIFGKAGRLEDALKLFDQMR 333