BLASTX nr result

ID: Glycyrrhiza23_contig00032155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032155
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003627060.1| DNA repair protein radA-like protein [Medica...   125   5e-27
ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [...   115   5e-24
emb|CBI36035.3| unnamed protein product [Vitis vinifera]              102   3e-20
ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [...   102   3e-20
ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>ref|XP_003627060.1| DNA repair protein radA-like protein [Medicago truncatula]
           gi|355521082|gb|AET01536.1| DNA repair protein radA-like
           protein [Medicago truncatula]
          Length = 643

 Score =  125 bits (313), Expect = 5e-27
 Identities = 65/66 (98%), Positives = 66/66 (100%)
 Frame = +3

Query: 3   MFLSEQDLDSEVLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISV 182
           MFLSEQDLDS+VLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISV
Sbjct: 377 MFLSEQDLDSDVLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISV 436

Query: 183 LIKQAG 200
           LIKQAG
Sbjct: 437 LIKQAG 442


>ref|XP_003531642.1| PREDICTED: DNA repair protein RadA homolog [Glycine max]
          Length = 560

 Score =  115 bits (287), Expect = 5e-24
 Identities = 61/66 (92%), Positives = 62/66 (93%)
 Frame = +3

Query: 3   MFLSEQDLDSEVLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISV 182
           MFLSEQ LDSE+LAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQ NGIQ  RADMIISV
Sbjct: 378 MFLSEQLLDSEILAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQVNGIQQKRADMIISV 437

Query: 183 LIKQAG 200
           LIKQAG
Sbjct: 438 LIKQAG 443


>emb|CBI36035.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = +3

Query: 3   MFLSEQDLDSEVLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISV 182
           +FLSEQ+ DSE+L GLAVAVIMDGSR+FL+EIQALCLSGST +RQ NG+ A+RADMII+V
Sbjct: 406 LFLSEQNSDSEILTGLAVAVIMDGSRSFLLEIQALCLSGSTVARQVNGVPASRADMIIAV 465

Query: 183 LIKQAG 200
           L+KQAG
Sbjct: 466 LMKQAG 471


>ref|XP_002277638.1| PREDICTED: DNA repair protein RadA homolog [Vitis vinifera]
          Length = 624

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/66 (77%), Positives = 61/66 (92%)
 Frame = +3

Query: 3   MFLSEQDLDSEVLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISV 182
           +FLSEQ+ DSE+L GLAVAVIMDGSR+FL+EIQALCLSGST +RQ NG+ A+RADMII+V
Sbjct: 447 LFLSEQNSDSEILTGLAVAVIMDGSRSFLLEIQALCLSGSTVARQVNGVPASRADMIIAV 506

Query: 183 LIKQAG 200
           L+KQAG
Sbjct: 507 LMKQAG 512


>ref|XP_002299746.1| predicted protein [Populus trichocarpa] gi|222847004|gb|EEE84551.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/66 (78%), Positives = 60/66 (90%)
 Frame = +3

Query: 3   MFLSEQDLDSEVLAGLAVAVIMDGSRTFLIEIQALCLSGSTGSRQFNGIQANRADMIISV 182
           +FL+EQ  DS+ LAGLAVAVIMDGSR+FLIEIQALC+SGS+ SR  NGIQ++RADMIISV
Sbjct: 347 IFLTEQHSDSDFLAGLAVAVIMDGSRSFLIEIQALCVSGSSVSRHINGIQSSRADMIISV 406

Query: 183 LIKQAG 200
           LIKQAG
Sbjct: 407 LIKQAG 412


Top