BLASTX nr result

ID: Glycyrrhiza23_contig00032144 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032144
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [...   171   8e-41
ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containi...   168   5e-40
ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   136   2e-30

>ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  171 bits (432), Expect = 8e-41
 Identities = 83/95 (87%), Positives = 90/95 (94%)
 Frame = -1

Query: 285  LISAGIVPNTVTYNTMMSSICSDILDRAMILTAKLLKMGFIPNVITTNILLSHFCKQGMP 106
            LISAGIVP+TVTYNTM+S ICSDILDRAMILTAKLLKMGFIPNVITTN+LLSHFCKQGMP
Sbjct: 728  LISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMP 787

Query: 105  ERALLWGQKLREICFDFDEISYRILDNAYHLVQDE 1
            E+AL+WGQKLREI F FDEISYRILD AY L+QD+
Sbjct: 788  EKALIWGQKLREISFGFDEISYRILDQAYCLMQDD 822


>ref|XP_003556653.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 581

 Score =  168 bits (425), Expect = 5e-40
 Identities = 79/95 (83%), Positives = 89/95 (93%)
 Frame = -1

Query: 285 LISAGIVPNTVTYNTMMSSICSDILDRAMILTAKLLKMGFIPNVITTNILLSHFCKQGMP 106
           LISAGIVP+TVTYNTM+S ICSDILD AMI TAKLLKMGF+PNVITTN+LLSHFCKQGMP
Sbjct: 471 LISAGIVPDTVTYNTMLSGICSDILDHAMIFTAKLLKMGFLPNVITTNMLLSHFCKQGMP 530

Query: 105 ERALLWGQKLREICFDFDEISYRILDNAYHLVQDE 1
           E+AL+WGQKLREI FDFDEISY+I+D AY L+QD+
Sbjct: 531 EKALIWGQKLREISFDFDEISYQIMDQAYRLMQDD 565


>ref|XP_002326842.1| predicted protein [Populus trichocarpa] gi|222835157|gb|EEE73592.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score =  148 bits (373), Expect = 5e-34
 Identities = 64/94 (68%), Positives = 83/94 (88%)
 Frame = -1

Query: 285 LISAGIVPNTVTYNTMMSSICSDILDRAMILTAKLLKMGFIPNVITTNILLSHFCKQGMP 106
           LISAG+VP+TVTYNT+M+ +C+D+L+RAMI+TAKLLKM F+PNV+T N+LLSHFCKQGMP
Sbjct: 630 LISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMP 689

Query: 105 ERALLWGQKLREICFDFDEISYRILDNAYHLVQD 4
           E+ ++WGQKL EI F FDEIS +++D AY  +QD
Sbjct: 690 EKTIMWGQKLNEISFGFDEISIKLMDRAYRNIQD 723


>ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein At5g39710-like
            [Vitis vinifera]
          Length = 889

 Score =  145 bits (367), Expect = 3e-33
 Identities = 65/94 (69%), Positives = 83/94 (88%)
 Frame = -1

Query: 285  LISAGIVPNTVTYNTMMSSICSDILDRAMILTAKLLKMGFIPNVITTNILLSHFCKQGMP 106
            L+SAGIVPNTVTYN+M++ +CSDILDRAMILTA+LLKM F+PNV+T N+LLS F KQGMP
Sbjct: 747  LVSAGIVPNTVTYNSMLNGVCSDILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMP 806

Query: 105  ERALLWGQKLREICFDFDEISYRILDNAYHLVQD 4
            ER L+WG KL EI + FDEI+Y+I+D A+H+++D
Sbjct: 807  ERTLMWGHKLSEIPYAFDEITYKIMDKAHHILED 840


>ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At1g19290-like [Cucumis
            sativus]
          Length = 885

 Score =  136 bits (342), Expect = 2e-30
 Identities = 60/94 (63%), Positives = 79/94 (84%)
 Frame = -1

Query: 285  LISAGIVPNTVTYNTMMSSICSDILDRAMILTAKLLKMGFIPNVITTNILLSHFCKQGMP 106
            LIS GIVPNTVTYNTM++++C+ ILD AMILTAKLLKM F+PN +T N+LLS FCKQGMP
Sbjct: 738  LISVGIVPNTVTYNTMINAVCNVILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMP 797

Query: 105  ERALLWGQKLREICFDFDEISYRILDNAYHLVQD 4
            E+A+ WGQKL EI  DFDE ++++++ AY  +++
Sbjct: 798  EKAIFWGQKLSEIHLDFDETTHKLMNRAYRALEE 831


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