BLASTX nr result

ID: Glycyrrhiza23_contig00032143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032143
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513311.1| splicing endonuclease positive effector sen1...    84   1e-14
ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsi...    84   2e-14
ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arab...    74   2e-11
gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease p...    70   1e-10
gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japo...    63   2e-08

>ref|XP_002513311.1| splicing endonuclease positive effector sen1, putative [Ricinus
           communis] gi|223547219|gb|EEF48714.1| splicing
           endonuclease positive effector sen1, putative [Ricinus
           communis]
          Length = 2110

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/71 (56%), Positives = 52/71 (73%)
 Frame = +1

Query: 31  LCQMTCVRLLEILPVLIDKLCLFGGKELGNFTMLVKNKLGFSWLHDLMEWGKSSLKVVIV 210
           L QMTCVR+LEILPV+ ++LC    K   +    V+N   F WLHDL++WG+SSLKVV+V
Sbjct: 531 LFQMTCVRVLEILPVVYERLCPSIRKRSRDSGKTVENLWDFIWLHDLIDWGRSSLKVVVV 590

Query: 211 YWRRALTYLLN 243
           YW+R +T LLN
Sbjct: 591 YWKRTVTSLLN 601


>ref|NP_173124.2| hydrolase domain-containing protein [Arabidopsis thaliana]
           gi|332191377|gb|AEE29498.1| hydrolase domain-containing
           protein [Arabidopsis thaliana]
          Length = 2127

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/82 (50%), Positives = 58/82 (70%)
 Frame = +1

Query: 1   IKGKEFIDYNLCQMTCVRLLEILPVLIDKLCLFGGKELGNFTMLVKNKLGFSWLHDLMEW 180
           ++GK FI  +LCQMTCVRLLEILPV++ KL +   +E  +    +K+     WL DL++W
Sbjct: 694 VEGKTFIHQSLCQMTCVRLLEILPVVLGKLRV-SREESCDTRGTLKDASDLKWLPDLIDW 752

Query: 181 GKSSLKVVIVYWRRALTYLLNL 246
           G+S LKVV+ YW+RAL  LL++
Sbjct: 753 GRSQLKVVVAYWKRALVALLDI 774


>ref|XP_002892921.1| hypothetical protein ARALYDRAFT_312653 [Arabidopsis lyrata subsp.
           lyrata] gi|297338763|gb|EFH69180.1| hypothetical protein
           ARALYDRAFT_312653 [Arabidopsis lyrata subsp. lyrata]
          Length = 2129

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/75 (48%), Positives = 53/75 (70%)
 Frame = +1

Query: 22  DYNLCQMTCVRLLEILPVLIDKLCLFGGKELGNFTMLVKNKLGFSWLHDLMEWGKSSLKV 201
           ++N+  MTCVRLLEILPV++ KL +   +E  +    +K+  G  WL DL++WG+S LKV
Sbjct: 607 NFNVLPMTCVRLLEILPVVLGKLRV-SREESFHTRGTLKDVSGLKWLPDLIDWGRSQLKV 665

Query: 202 VIVYWRRALTYLLNL 246
           V+ YW+RAL  LL++
Sbjct: 666 VVAYWKRALVALLDI 680


>gb|AAG09081.1|AC026237_2 Similar to tRNA-splicing endonuclease positive effector SEN1
           [Arabidopsis thaliana]
          Length = 2142

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/75 (46%), Positives = 51/75 (68%)
 Frame = +1

Query: 22  DYNLCQMTCVRLLEILPVLIDKLCLFGGKELGNFTMLVKNKLGFSWLHDLMEWGKSSLKV 201
           ++N   MTCVRLLEILPV++ KL +   +E  +    +K+     WL DL++WG+S LKV
Sbjct: 607 NFNALPMTCVRLLEILPVVLGKLRV-SREESCDTRGTLKDASDLKWLPDLIDWGRSQLKV 665

Query: 202 VIVYWRRALTYLLNL 246
           V+ YW+RAL  LL++
Sbjct: 666 VVAYWKRALVALLDI 680


>gb|EEE69980.1| hypothetical protein OsJ_29879 [Oryza sativa Japonica Group]
          Length = 2215

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 26/81 (32%), Positives = 50/81 (61%)
 Frame = +1

Query: 4   KGKEFIDYNLCQMTCVRLLEILPVLIDKLCLFGGKELGNFTMLVKNKLGFSWLHDLMEWG 183
           KG + I+   CQ++CVRLLE++P++ +++  +   +      +V +    +WL  L+ WG
Sbjct: 692 KGDDLINTKQCQISCVRLLELVPLVYERVSSYSSAKSCGVPTMVLDPTDITWLFHLINWG 751

Query: 184 KSSLKVVIVYWRRALTYLLNL 246
           KSSL V+I +W++ +  L+ +
Sbjct: 752 KSSLLVIIRHWKQCMLSLIKI 772


Top