BLASTX nr result

ID: Glycyrrhiza23_contig00032140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032140
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605599.1| Apocytochrome f [Medicago truncatula] gi|355...   217   9e-55
ref|YP_001381715.1| cytochrome f [Medicago truncatula]                217   9e-55
gb|ADD30944.1| cytochrome f protein [Liquidambar styraciflua]         216   2e-54
gb|ADD30948.1| cytochrome f protein [Staphylea colchica]              215   3e-54
ref|YP_002149746.1| cytochrome f [Cicer arietinum] gi|197089813|...   215   3e-54

>ref|XP_003605599.1| Apocytochrome f [Medicago truncatula] gi|355506654|gb|AES87796.1|
           Apocytochrome f [Medicago truncatula]
          Length = 543

 Score =  217 bits (552), Expect = 9e-55
 Identities = 111/115 (96%), Positives = 113/115 (98%)
 Frame = -2

Query: 388 FNATAAGIVNKIIRKEKGGYEITIVDASDRREVIDIIPPGPELLVSEGESIKLDQPLTSN 209
           +NATA GIVNKIIRKEKGGYEITIVDASD REVIDIIPPGPELLVSEGES+KLDQPLTSN
Sbjct: 429 YNATATGIVNKIIRKEKGGYEITIVDASDGREVIDIIPPGPELLVSEGESMKLDQPLTSN 488

Query: 208 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF 44
           PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF
Sbjct: 489 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF 543


>ref|YP_001381715.1| cytochrome f [Medicago truncatula]
          Length = 320

 Score =  217 bits (552), Expect = 9e-55
 Identities = 111/115 (96%), Positives = 113/115 (98%)
 Frame = -2

Query: 388 FNATAAGIVNKIIRKEKGGYEITIVDASDRREVIDIIPPGPELLVSEGESIKLDQPLTSN 209
           +NATA GIVNKIIRKEKGGYEITIVDASD REVIDIIPPGPELLVSEGES+KLDQPLTSN
Sbjct: 206 YNATATGIVNKIIRKEKGGYEITIVDASDGREVIDIIPPGPELLVSEGESMKLDQPLTSN 265

Query: 208 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF 44
           PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF
Sbjct: 266 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF 320


>gb|ADD30944.1| cytochrome f protein [Liquidambar styraciflua]
          Length = 320

 Score =  216 bits (550), Expect = 2e-54
 Identities = 109/115 (94%), Positives = 113/115 (98%)
 Frame = -2

Query: 388 FNATAAGIVNKIIRKEKGGYEITIVDASDRREVIDIIPPGPELLVSEGESIKLDQPLTSN 209
           +NATAAGIVNKIIRKEKGGYEITI DASD R+V+DIIPPGPELLVSEGESIKLDQPLTSN
Sbjct: 206 YNATAAGIVNKIIRKEKGGYEITIADASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSN 265

Query: 208 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF 44
           PNVGGFGQGDAEIVLQDPLRVQGLLFFLAS+ILAQIFLVLKKKQFEKVQLSEMNF
Sbjct: 266 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASVILAQIFLVLKKKQFEKVQLSEMNF 320


>gb|ADD30948.1| cytochrome f protein [Staphylea colchica]
          Length = 320

 Score =  215 bits (548), Expect = 3e-54
 Identities = 108/115 (93%), Positives = 114/115 (99%)
 Frame = -2

Query: 388 FNATAAGIVNKIIRKEKGGYEITIVDASDRREVIDIIPPGPELLVSEGESIKLDQPLTSN 209
           +NATAAGIV+KIIRKEKGGYEITIVDASD R+V+DIIPPGPELLVSEGESIKLDQPLTSN
Sbjct: 206 YNATAAGIVSKIIRKEKGGYEITIVDASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSN 265

Query: 208 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF 44
           PNVGGFGQGDAEIVLQDPLRVQGLLFFLAS++LAQIFLVLKKKQFEKVQLSEMNF
Sbjct: 266 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASVVLAQIFLVLKKKQFEKVQLSEMNF 320


>ref|YP_002149746.1| cytochrome f [Cicer arietinum] gi|197089813|gb|ACH41083.1|
           cytochrome f [Cicer arietinum]
          Length = 320

 Score =  215 bits (548), Expect = 3e-54
 Identities = 110/115 (95%), Positives = 112/115 (97%)
 Frame = -2

Query: 388 FNATAAGIVNKIIRKEKGGYEITIVDASDRREVIDIIPPGPELLVSEGESIKLDQPLTSN 209
           +NATA GIVNKIIRKEKGGYEITIVDA+D REVIDIIPPGPELLVSEGESIKLDQPLTSN
Sbjct: 206 YNATATGIVNKIIRKEKGGYEITIVDAADGREVIDIIPPGPELLVSEGESIKLDQPLTSN 265

Query: 208 PNVGGFGQGDAEIVLQDPLRVQGLLFFLASIILAQIFLVLKKKQFEKVQLSEMNF 44
           PNVGGFGQGDAEIVLQDPLRVQGLLFF ASIILAQIFLVLKKKQFEKVQLSEMNF
Sbjct: 266 PNVGGFGQGDAEIVLQDPLRVQGLLFFFASIILAQIFLVLKKKQFEKVQLSEMNF 320


Top