BLASTX nr result
ID: Glycyrrhiza23_contig00032136
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00032136 (264 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-... 160 1e-37 ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-... 154 9e-36 ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago... 150 8e-35 ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2... 124 8e-27 emb|CBI28088.3| unnamed protein product [Vitis vinifera] 118 6e-25 >ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max] Length = 1116 Score = 160 bits (405), Expect = 1e-37 Identities = 78/87 (89%), Positives = 83/87 (95%) Frame = +2 Query: 2 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIG+SFRS EQRSEFSTLHEEW Sbjct: 1018 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGQSFRSSEQRSEFSTLHEEW 1077 Query: 182 LKTLVSISRMDDCKSFDDDVLDTLVCL 262 LKTLVSISR++DC S D+D LDTL+CL Sbjct: 1078 LKTLVSISRIEDCNSLDEDALDTLICL 1104 >ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max] Length = 1079 Score = 154 bits (388), Expect = 9e-36 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +2 Query: 2 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181 RLASGPCPESYGLQVALMAGIPEKTVNIASK+SQ+MKKSIG+SFRS EQRSEFSTLHEEW Sbjct: 981 RLASGPCPESYGLQVALMAGIPEKTVNIASKSSQKMKKSIGQSFRSSEQRSEFSTLHEEW 1040 Query: 182 LKTLVSISRMDDCKSFDDDVLDTLVCL 262 LKTLVSISR++DC S D+D LDTL+ L Sbjct: 1041 LKTLVSISRIEDCNSLDEDALDTLISL 1067 >ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula] gi|355495528|gb|AES76731.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula] Length = 1160 Score = 150 bits (380), Expect = 8e-35 Identities = 74/87 (85%), Positives = 82/87 (94%) Frame = +2 Query: 2 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181 RLA G CPESYGLQVALMAGIPEKTVN+ASKASQQMK SIGK+FRS EQRSEFS+LHEEW Sbjct: 1062 RLAPGACPESYGLQVALMAGIPEKTVNVASKASQQMKISIGKNFRSSEQRSEFSSLHEEW 1121 Query: 182 LKTLVSISRMDDCKSFDDDVLDTLVCL 262 LKTL+SI+R++D +SFDDDVLDTLVCL Sbjct: 1122 LKTLMSIARIEDVESFDDDVLDTLVCL 1148 >ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1| predicted protein [Populus trichocarpa] Length = 1107 Score = 124 bits (311), Expect = 8e-27 Identities = 62/87 (71%), Positives = 68/87 (78%) Frame = +2 Query: 2 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181 RLASG CP SYGLQVA MAGIPE V AS A Q MK S G+SF+S E+RSEFSTLHEEW Sbjct: 1005 RLASGACPGSYGLQVATMAGIPEHVVEAASHAGQLMKNSTGESFKSSERRSEFSTLHEEW 1064 Query: 182 LKTLVSISRMDDCKSFDDDVLDTLVCL 262 LKTLV++SR+ DC DDDV DTL CL Sbjct: 1065 LKTLVNVSRIRDCNFDDDDVYDTLFCL 1091 >emb|CBI28088.3| unnamed protein product [Vitis vinifera] Length = 1126 Score = 118 bits (295), Expect = 6e-25 Identities = 57/87 (65%), Positives = 71/87 (81%) Frame = +2 Query: 2 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181 +L SG CPESYGLQVALMAG+P++ V AS A + MK+SIG+SFR+ EQRSEFSTLHEEW Sbjct: 1018 QLTSGACPESYGLQVALMAGVPKEVVEAASTAGRMMKQSIGESFRTSEQRSEFSTLHEEW 1077 Query: 182 LKTLVSISRMDDCKSFDDDVLDTLVCL 262 LK L+++SR+ + +FDDD DTL CL Sbjct: 1078 LKALLTVSRLGE-HNFDDDAWDTLFCL 1103