BLASTX nr result

ID: Glycyrrhiza23_contig00032136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032136
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-...   160   1e-37
ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-...   154   9e-36
ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago...   150   8e-35
ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...   124   8e-27
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              118   6e-25

>ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
          Length = 1116

 Score =  160 bits (405), Expect = 1e-37
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 2    RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181
            RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIG+SFRS EQRSEFSTLHEEW
Sbjct: 1018 RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGQSFRSSEQRSEFSTLHEEW 1077

Query: 182  LKTLVSISRMDDCKSFDDDVLDTLVCL 262
            LKTLVSISR++DC S D+D LDTL+CL
Sbjct: 1078 LKTLVSISRIEDCNSLDEDALDTLICL 1104


>ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
          Length = 1079

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/87 (86%), Positives = 82/87 (94%)
 Frame = +2

Query: 2    RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181
            RLASGPCPESYGLQVALMAGIPEKTVNIASK+SQ+MKKSIG+SFRS EQRSEFSTLHEEW
Sbjct: 981  RLASGPCPESYGLQVALMAGIPEKTVNIASKSSQKMKKSIGQSFRSSEQRSEFSTLHEEW 1040

Query: 182  LKTLVSISRMDDCKSFDDDVLDTLVCL 262
            LKTLVSISR++DC S D+D LDTL+ L
Sbjct: 1041 LKTLVSISRIEDCNSLDEDALDTLISL 1067


>ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
            gi|355495528|gb|AES76731.1| DNA mismatch repair protein
            Msh6-2 [Medicago truncatula]
          Length = 1160

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/87 (85%), Positives = 82/87 (94%)
 Frame = +2

Query: 2    RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181
            RLA G CPESYGLQVALMAGIPEKTVN+ASKASQQMK SIGK+FRS EQRSEFS+LHEEW
Sbjct: 1062 RLAPGACPESYGLQVALMAGIPEKTVNVASKASQQMKISIGKNFRSSEQRSEFSSLHEEW 1121

Query: 182  LKTLVSISRMDDCKSFDDDVLDTLVCL 262
            LKTL+SI+R++D +SFDDDVLDTLVCL
Sbjct: 1122 LKTLMSIARIEDVESFDDDVLDTLVCL 1148


>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
            predicted protein [Populus trichocarpa]
          Length = 1107

 Score =  124 bits (311), Expect = 8e-27
 Identities = 62/87 (71%), Positives = 68/87 (78%)
 Frame = +2

Query: 2    RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181
            RLASG CP SYGLQVA MAGIPE  V  AS A Q MK S G+SF+S E+RSEFSTLHEEW
Sbjct: 1005 RLASGACPGSYGLQVATMAGIPEHVVEAASHAGQLMKNSTGESFKSSERRSEFSTLHEEW 1064

Query: 182  LKTLVSISRMDDCKSFDDDVLDTLVCL 262
            LKTLV++SR+ DC   DDDV DTL CL
Sbjct: 1065 LKTLVNVSRIRDCNFDDDDVYDTLFCL 1091


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/87 (65%), Positives = 71/87 (81%)
 Frame = +2

Query: 2    RLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSIGKSFRSCEQRSEFSTLHEEW 181
            +L SG CPESYGLQVALMAG+P++ V  AS A + MK+SIG+SFR+ EQRSEFSTLHEEW
Sbjct: 1018 QLTSGACPESYGLQVALMAGVPKEVVEAASTAGRMMKQSIGESFRTSEQRSEFSTLHEEW 1077

Query: 182  LKTLVSISRMDDCKSFDDDVLDTLVCL 262
            LK L+++SR+ +  +FDDD  DTL CL
Sbjct: 1078 LKALLTVSRLGE-HNFDDDAWDTLFCL 1103


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