BLASTX nr result

ID: Glycyrrhiza23_contig00032104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032104
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase...   110   9e-23
ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_003520156.1| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
           [Glycine max]
          Length = 1329

 Score =  110 bits (276), Expect = 9e-23
 Identities = 56/85 (65%), Positives = 60/85 (70%)
 Frame = +2

Query: 2   KESLSLSFNGHSNFRYERFDRTPXXXXXXXXXXXXXXXXTYRVPIKPCLLNGLRQSTLLH 181
           KE  SLSFNG+SNF YERFDRTP                TYRVPIKPCL+NGLRQS LL 
Sbjct: 16  KEPFSLSFNGYSNFCYERFDRTPSYCLSCCGCCDYCSVSTYRVPIKPCLINGLRQSALLQ 75

Query: 182 LSASRRLILGGEEQYFSRVPTYGVL 256
           LSASRRLILGG + Y SR+P YGVL
Sbjct: 76  LSASRRLILGGGDHYLSRLPAYGVL 100


>ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1|
           predicted protein [Populus trichocarpa]
          Length = 1364

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 37/99 (37%), Positives = 45/99 (45%), Gaps = 15/99 (15%)
 Frame = +2

Query: 2   KESLSLSFNGHSNFRYERFDRTPXXXXXXXXXXXXXXXXTY---------------RVPI 136
           K SLS SFN +SN   ERF+R P                                 R PI
Sbjct: 16  KGSLSFSFNDYSNLLSERFERNPFLLQSCSSSCNKSCCCCCCSASSSSFSTTTTIRRAPI 75

Query: 137 KPCLLNGLRQSTLLHLSASRRLILGGEEQYFSRVPTYGV 253
            P L  G RQST++    SRRLILGG ++Y+ R P YG+
Sbjct: 76  NPGLFFGFRQSTIIQCPPSRRLILGGRDRYYYRSPAYGL 114


Top