BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032103
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08697.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    83   8e-17
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    82   6e-16
ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002309388.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]          62   6e-08

>gb|ABN08697.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 291

 Score = 82.8 bits (203), Expect(2) = 8e-17
 Identities = 34/62 (54%), Positives = 50/62 (80%)
 Frame = +3

Query: 3   ESKLAAWKGKLLNKSGRLTLAKSVLASTPSYGMQLLWYPQHLCDYLDRTVLSFVWKGTTD 182
           +++LA+W  KLLN++GR+TLA SVL+S P+Y MQ+ W PQ++CD +D T  +FVWKGT +
Sbjct: 64  QARLASWNNKLLNRTGRVTLATSVLSSIPTYYMQINWLPQNICDSIDHTTRNFVWKGTDN 123

Query: 183 RG 188
           +G
Sbjct: 124 KG 125



 Score = 28.9 bits (63), Expect(2) = 8e-17
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 185 GLHMVNWNEITKPTKR*GL 241
           G+H+VNW ++TKP    GL
Sbjct: 125 GIHLVNWQKVTKPKHMGGL 143


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score = 81.6 bits (200), Expect(2) = 6e-16
 Identities = 32/62 (51%), Positives = 52/62 (83%)
 Frame = +3

Query: 3   ESKLAAWKGKLLNKSGRLTLAKSVLASTPSYGMQLLWYPQHLCDYLDRTVLSFVWKGTTD 182
           +++LA+WK +LLN++GRLTLA SVL++ P+Y MQ+ W PQ++CD +D+T  +F+WKG+ +
Sbjct: 775 QTRLASWKNRLLNRTGRLTLATSVLSTIPTYYMQINWLPQNICDSIDQTARNFLWKGSNN 834

Query: 183 RG 188
           +G
Sbjct: 835 KG 836



 Score = 26.9 bits (58), Expect(2) = 6e-16
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +2

Query: 185 GLHMVNWNEITKPTKR*GL 241
           G+H+VNW  IT+P    GL
Sbjct: 836 GIHLVNWKTITRPKSIGGL 854


>ref|XP_002317858.1| predicted protein [Populus trichocarpa] gi|222858531|gb|EEE96078.1|
           predicted protein [Populus trichocarpa]
          Length = 1052

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
 Frame = +3

Query: 3   ESKLAAWKGKLLNKSGRLTLAKSVLASTPSYGMQLLWYPQHLCDYLDRTVLSFVWKGTTD 182
           + +LA WKGKLLNK+GR+TLAKSV+ S P Y MQ +W P   C  +D+ V  F+W G  +
Sbjct: 620 KGRLAEWKGKLLNKAGRITLAKSVIISMPIYLMQNMWLPNATCMQIDKIVKQFIW-GNQE 678

Query: 183 RGCIWS-IGMRLQNPPRGEG 239
            G  W+ I   +   PR  G
Sbjct: 679 TGGSWNLINWNMVTRPRING 698


>ref|XP_002309388.1| predicted protein [Populus trichocarpa] gi|222855364|gb|EEE92911.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 28/79 (35%), Positives = 50/79 (63%)
 Frame = +3

Query: 3   ESKLAAWKGKLLNKSGRLTLAKSVLASTPSYGMQLLWYPQHLCDYLDRTVLSFVWKGTTD 182
           +S+   WK +LLNK GR  LA++V++STP+Y MQ+ W PQ +C+ +++ + +F+W  +  
Sbjct: 386 QSRQTDWKQRLLNKLGRDMLARAVISSTPTYAMQIFWLPQSICNGINKLIRNFIWGRSNG 445

Query: 183 RGCIWSIGMRLQNPPRGEG 239
            G ++ +     + PR  G
Sbjct: 446 EGGLYLVNWESVSCPRRIG 464


>gb|AEL30350.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 673

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/59 (45%), Positives = 41/59 (69%)
 Frame = +3

Query: 6   SKLAAWKGKLLNKSGRLTLAKSVLASTPSYGMQLLWYPQHLCDYLDRTVLSFVWKGTTD 182
           S+LA+WKG LLN++GRL L  SV A+ P+Y MQ+  +P+ +   L+  + +F+WKG  D
Sbjct: 107 SRLASWKGSLLNRAGRLCLVNSVAAAIPTYQMQVSIFPKGIISKLESMMRNFLWKGQVD 165