BLASTX nr result

ID: Glycyrrhiza23_contig00032078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032078
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545968.1| PREDICTED: protein KIAA0664 homolog [Glycine...    98   6e-19
ref|XP_003532873.1| PREDICTED: protein KIAA0664 homolog [Glycine...    97   2e-18
ref|XP_002513198.1| eukaryotic translation initiation factor 3 s...    88   6e-16
ref|XP_002263417.2| PREDICTED: protein KIAA0664 homolog [Vitis v...    85   5e-15
emb|CBI24851.3| unnamed protein product [Vitis vinifera]               85   5e-15

>ref|XP_003545968.1| PREDICTED: protein KIAA0664 homolog [Glycine max]
          Length = 1433

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 56/115 (48%), Positives = 69/115 (60%), Gaps = 16/115 (13%)
 Frame = -3

Query: 299 MAGKSNKGRSKRGXXXXXXXXXXXXSEHVPAA-NAKDHREDAKADSADKTPNAD------ 141
           MAGKS KGR+++G              +VP   N +   E AK D+AD   N+       
Sbjct: 1   MAGKSGKGRNRKGSHNASSASEPPVHSNVPVKDNVEVTLESAKTDAADAAGNSTVANPEV 60

Query: 140 ---------TEQKQGDIHLYPVPVKTQTGEKLELQLSPGDTVMGIRQFLLDAPET 3
                    ++QKQGD+ LYPV VKTQTGEKLELQL+PGD+VM +RQFLLDAPET
Sbjct: 61  KENETTTEGSQQKQGDLQLYPVSVKTQTGEKLELQLNPGDSVMDVRQFLLDAPET 115


>ref|XP_003532873.1| PREDICTED: protein KIAA0664 homolog [Glycine max]
          Length = 1442

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 56/117 (47%), Positives = 68/117 (58%), Gaps = 18/117 (15%)
 Frame = -3

Query: 299 MAGKSNKGRSKRGXXXXXXXXXXXXSEHVPAA-NAKDHREDAKADSADKTPNADT----- 138
           MAGKS KGR+++G               VP   N +   E AKAD+A+     D+     
Sbjct: 1   MAGKSGKGRNRKGSHNASSASESAVHSDVPVKDNVEVTLESAKADAAEVAAGGDSIVANP 60

Query: 137 ------------EQKQGDIHLYPVPVKTQTGEKLELQLSPGDTVMGIRQFLLDAPET 3
                       +QKQGD+ LYPV VKTQTGEKLELQL+PGD+VM +RQFLLDAPET
Sbjct: 61  EVKENETATEGSQQKQGDLQLYPVSVKTQTGEKLELQLNPGDSVMDVRQFLLDAPET 117


>ref|XP_002513198.1| eukaryotic translation initiation factor 3 subunit, putative
           [Ricinus communis] gi|223547696|gb|EEF49189.1|
           eukaryotic translation initiation factor 3 subunit,
           putative [Ricinus communis]
          Length = 1424

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/120 (45%), Positives = 68/120 (56%), Gaps = 21/120 (17%)
 Frame = -3

Query: 299 MAGKSNKGRSKRGXXXXXXXXXXXXSEHVPAANAKDH---REDAKAD------------- 168
           MAGKSN+GR+++G                 +A  KD+    E AKAD             
Sbjct: 1   MAGKSNRGRNRKGSNTTTNSSSESAV--TASAPVKDNLIASETAKADANGVPAVIESTNA 58

Query: 167 -----SADKTPNADTEQKQGDIHLYPVPVKTQTGEKLELQLSPGDTVMGIRQFLLDAPET 3
                S  +T  +  E KQG++HLYPV VKTQ+ EKLELQL+PGD+VM IRQFLLDAPET
Sbjct: 59  IPPGGSESETTTSANEPKQGELHLYPVSVKTQSSEKLELQLNPGDSVMDIRQFLLDAPET 118


>ref|XP_002263417.2| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
          Length = 1442

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 17/116 (14%)
 Frame = -3

Query: 299 MAGKSNKGRSKRGXXXXXXXXXXXXS------EHVPAANAKDHREDAKADSAD------- 159
           MAGKSNKGR++RG            S      ++V A+ +     +    +A+       
Sbjct: 1   MAGKSNKGRNRRGSHSATNSSEPVGSSDSQMKDNVTASGSNQAEANGVMATAESNSTNSE 60

Query: 158 ----KTPNADTEQKQGDIHLYPVPVKTQTGEKLELQLSPGDTVMGIRQFLLDAPET 3
               +T N     KQG+I+LYPV VKTQ GEKLELQL+PGD+VM +RQFLLDAPET
Sbjct: 61  VKESETANTKDGSKQGEINLYPVSVKTQGGEKLELQLNPGDSVMDVRQFLLDAPET 116


>emb|CBI24851.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 52/116 (44%), Positives = 67/116 (57%), Gaps = 17/116 (14%)
 Frame = -3

Query: 299 MAGKSNKGRSKRGXXXXXXXXXXXXS------EHVPAANAKDHREDAKADSAD------- 159
           MAGKSNKGR++RG            S      ++V A+ +     +    +A+       
Sbjct: 1   MAGKSNKGRNRRGSHSATNSSEPVGSSDSQMKDNVTASGSNQAEANGVMATAESNSTNSE 60

Query: 158 ----KTPNADTEQKQGDIHLYPVPVKTQTGEKLELQLSPGDTVMGIRQFLLDAPET 3
               +T N     KQG+I+LYPV VKTQ GEKLELQL+PGD+VM +RQFLLDAPET
Sbjct: 61  VKESETANTKDGSKQGEINLYPVSVKTQGGEKLELQLNPGDSVMDVRQFLLDAPET 116


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