BLASTX nr result

ID: Glycyrrhiza23_contig00032071 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032071
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544737.1| PREDICTED: probable auxin efflux carrier com...    94   9e-18
ref|XP_003543954.1| PREDICTED: probable auxin efflux carrier com...    92   6e-17
gb|AAT48627.1| putative auxin efflux carrier protein 6 [Medicago...    91   1e-16
ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lyc...    88   8e-16
ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier com...    86   2e-15

>ref|XP_003544737.1| PREDICTED: probable auxin efflux carrier component 6-like [Glycine
           max]
          Length = 531

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 59/101 (58%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = -3

Query: 308 ETDDNGXXXXXXXXXXXXXXXXXXXSMGNAGGIVTPTRLSNLSNADIFSINTPLQVLDGG 129
           ETDD G                     GN   +VTP R SNLSNADIFSINTPL + DGG
Sbjct: 197 ETDDQGRIRVRIRRSVSSVPETNSSIGGNTA-VVTP-RPSNLSNADIFSINTPLHLHDGG 254

Query: 128 -DFPFGGYPAASPRLSGYASSDAYSLQPTPRASNFNEMDTA 9
            DF  G    ASP LSGYASSDAYSLQPTPRASNFNEM+ +
Sbjct: 255 GDFAAG----ASPHLSGYASSDAYSLQPTPRASNFNEMEAS 291


>ref|XP_003543954.1| PREDICTED: probable auxin efflux carrier component 6-like [Glycine
           max]
          Length = 464

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 59/102 (57%), Positives = 64/102 (62%)
 Frame = -3

Query: 308 ETDDNGXXXXXXXXXXXXXXXXXXXSMGNAGGIVTPTRLSNLSNADIFSINTPLQVLDGG 129
           ETDD+G                     GN   +VTP R SNLSNADIFSINTPL + +GG
Sbjct: 197 ETDDHGRIHVRIRRSVSSAPETNSSIGGNTT-VVTP-RQSNLSNADIFSINTPLHLHEGG 254

Query: 128 DFPFGGYPAASPRLSGYASSDAYSLQPTPRASNFNEMDTAGT 3
                G   ASP LSGYASSDAYSLQPTPRASNFNEM+ AGT
Sbjct: 255 GNLAAG---ASPHLSGYASSDAYSLQPTPRASNFNEME-AGT 292


>gb|AAT48627.1| putative auxin efflux carrier protein 6 [Medicago truncatula]
          Length = 527

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 54/101 (53%), Positives = 60/101 (59%)
 Frame = -3

Query: 308 ETDDNGXXXXXXXXXXXXXXXXXXXSMGNAGGIVTPTRLSNLSNADIFSINTPLQVLDGG 129
           ETD+NG                   S+G +    TPTRLSNLSNADIFSINTP   LD  
Sbjct: 197 ETDENGRIKVRIRRSISSAPPESTSSLGKS---FTPTRLSNLSNADIFSINTPGNFLDN- 252

Query: 128 DFPFGGYPAASPRLSGYASSDAYSLQPTPRASNFNEMDTAG 6
                     SP+LSGYAS+DAYSLQPTPRASNFNEM+  G
Sbjct: 253 --------MTSPQLSGYASTDAYSLQPTPRASNFNEMEIVG 285


>ref|NP_001234199.1| auxin efflux facilitator SlPIN6 [Solanum lycopersicum]
           gi|327187149|gb|ADR30414.2| auxin efflux facilitator
           SlPIN6 [Solanum lycopersicum]
          Length = 538

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 50/72 (69%), Positives = 56/72 (77%), Gaps = 7/72 (9%)
 Frame = -3

Query: 209 VTPTRLSNLSNADIFSINTPLQVLDGGDFPFG------GYPAASPRLSG-YASSDAYSLQ 51
           +TP R SNLSNA+IFS++TPL     GD PFG      G+ AASPRLSG YASSDAYSLQ
Sbjct: 223 ITP-RASNLSNAEIFSVHTPLH---NGDIPFGHGDLGVGFRAASPRLSGGYASSDAYSLQ 278

Query: 50  PTPRASNFNEMD 15
           PTPRASNFNE+D
Sbjct: 279 PTPRASNFNELD 290


>ref|XP_002278449.2| PREDICTED: probable auxin efflux carrier component 6-like [Vitis
           vinifera]
          Length = 532

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/76 (63%), Positives = 55/76 (72%), Gaps = 10/76 (13%)
 Frame = -3

Query: 209 VTPTRLSNLSNADIFSINTPLQVLD----GGDFPFG------GYPAASPRLSGYASSDAY 60
           +TP R SNLS A+IFS+NTP  + +      D  FG      GY +ASPRLSGYASSDAY
Sbjct: 224 ITP-RASNLSGAEIFSVNTPAPLHEYHNGNADIAFGNGDLGFGYRSASPRLSGYASSDAY 282

Query: 59  SLQPTPRASNFNEMDT 12
           SLQPTPRASNFNE+DT
Sbjct: 283 SLQPTPRASNFNELDT 298


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