BLASTX nr result

ID: Glycyrrhiza23_contig00032068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032068
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12

>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 813

 Score =  107 bits (266), Expect = 1e-21
 Identities = 55/74 (74%), Positives = 62/74 (83%)
 Frame = +1

Query: 178 LQLCTLSHTLSQTKQVHAFAILNGTLPRSVSLCASLMLQYATFGGQHHAITSFLLFQSSV 357
           LQLCTL  TLSQTKQVHA+++L+G LPRSVSLCASL+LQYA+FG   H   S LLFQ SV
Sbjct: 41  LQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFG---HPSNSLLLFQHSV 97

Query: 358 AYSRTPFLWNTLIR 399
           AYSR+ FLWNTLIR
Sbjct: 98  AYSRSAFLWNTLIR 111


>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 833

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 43/74 (58%), Positives = 48/74 (64%)
 Frame = +1

Query: 178 LQLCTLSHTLSQTKQVHAFAILNGTLPRSVSLCASLMLQYATFGGQHHAITSFLLFQSSV 357
           L LC+   +L QTKQVHA  ILNG LPRSVSLCASL+L YA F    H  +   LF  + 
Sbjct: 61  LTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKF---QHPGSFCSLFNQTF 117

Query: 358 AYSRTPFLWNTLIR 399
              RT FLWNTLIR
Sbjct: 118 QNCRTAFLWNTLIR 131


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