BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032066
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containi...   156   1e-36
ref|XP_003607325.1| Pentatricopeptide repeat-containing protein ...   153   2e-35
ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containi...   142   3e-32
ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containi...   138   4e-31

>ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/78 (93%), Positives = 76/78 (97%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y VLINGLCNHGQLENAGK+LKEMDGNN TP+VL+YNTLIAGHFKEGNLQEAFRLHDEML
Sbjct: 749 YNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEML 808

Query: 177 DKGLVPDDTTYDILVNGK 124
           DKGLVPDDTTYDILVNGK
Sbjct: 809 DKGLVPDDTTYDILVNGK 826



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y +++  LC  G++  A  +  +M G   TPS++ YN +I GH K+G + +A  + + ++
Sbjct: 434 YNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGII 493

Query: 177 DKGLVPDDTTYDILVNGKF-KGSHTHAAA*FTQVRLMAYILLMDFLANESCRKLLNGL 7
           + GL P+  TY IL+ G F KG   HA   F Q+ + A I+  D+  N     ++NGL
Sbjct: 494 ESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQM-VAAGIVPTDYTFN----SIINGL 546



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/80 (32%), Positives = 48/80 (60%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  +I G C  G +++A +V+  +  +   P+ + Y  L+ G FK+G+ + AF + D+M+
Sbjct: 469 YNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMV 528

Query: 177 DKGLVPDDTTYDILVNGKFK 118
             G+VP D T++ ++NG  K
Sbjct: 529 AAGIVPTDYTFNSIINGLCK 548



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/77 (38%), Positives = 44/77 (57%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y ++I+   N   +E A  + KEM  N     + +Y +LI G  KEG L  A  L+ EML
Sbjct: 679 YNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEML 738

Query: 177 DKGLVPDDTTYDILVNG 127
            +G+VPD   Y++L+NG
Sbjct: 739 CRGIVPDIFMYNVLING 755



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 27/77 (35%), Positives = 43/77 (55%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  +I+G    G +++A  V +EM  +  +P+V+ Y +LI G  K   +  A ++HD+M 
Sbjct: 574 YNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMK 633

Query: 177 DKGLVPDDTTYDILVNG 127
            KGL  D T Y  L+ G
Sbjct: 634 RKGLELDITVYATLIAG 650


>ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355508380|gb|AES89522.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  153 bits (386), Expect = 2e-35
 Identities = 74/84 (88%), Positives = 78/84 (92%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           YTVLINGL N+GQLENA K+LKEMDGNN TPSVLVYN LIAG+F+EGNLQEAFRLHDEML
Sbjct: 747 YTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDEML 806

Query: 177 DKGLVPDDTTYDILVNGKFKGSHT 106
           DKGLVPDDTTYDILVNGK K SHT
Sbjct: 807 DKGLVPDDTTYDILVNGKLKVSHT 830



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/117 (30%), Positives = 62/117 (52%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y +L+  L   G++  A  + ++M     TPS++ YN LI GH K+G + +A+ +   +L
Sbjct: 432 YNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSIL 491

Query: 177 DKGLVPDDTTYDILVNGKFKGSHTHAAA*FTQVRLMAYILLMDFLANESCRKLLNGL 7
           ++GL P+  TY +L++G FK   +  A    +  + A I   D   N     ++NGL
Sbjct: 492 ERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFN----TVINGL 544



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/77 (37%), Positives = 42/77 (54%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  +I+G  +   +E A  + +EM  N     + VY ++I G  KEG L  A  L+ EML
Sbjct: 677 YNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEML 736

Query: 177 DKGLVPDDTTYDILVNG 127
            K +VPD   Y +L+NG
Sbjct: 737 SKDIVPDIVMYTVLING 753



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/80 (32%), Positives = 42/80 (52%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y+ LI+G C    +E+A K   E+     TP+ +VYN++I+G     N++ A  LH EM+
Sbjct: 642 YSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMI 701

Query: 177 DKGLVPDDTTYDILVNGKFK 118
              +  D   Y  ++ G  K
Sbjct: 702 KNKVPCDLQVYTSIIGGLLK 721


>ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/81 (81%), Positives = 74/81 (91%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           +TVLINGLCN GQ ENA K+L++M+G N  PSVL+YNTLIAGHFKEGNLQEAFRLHDEML
Sbjct: 567 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML 626

Query: 177 DKGLVPDDTTYDILVNGKFKG 115
           D+GLVPD+ TYDILVNGKFKG
Sbjct: 627 DRGLVPDNITYDILVNGKFKG 647



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/80 (33%), Positives = 48/80 (60%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           +  L++ LC  G++  A  +  E+     +P+V+ YN +I GH ++ N+  A +++ EML
Sbjct: 252 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 311

Query: 177 DKGLVPDDTTYDILVNGKFK 118
           D G  P+  T+ IL++G FK
Sbjct: 312 DNGFTPNAVTFTILMDGYFK 331



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/84 (34%), Positives = 46/84 (54%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  +I G C    +  A KV KEM  N  TP+ + +  L+ G+FK+G+++ AF +   M 
Sbjct: 287 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346

Query: 177 DKGLVPDDTTYDILVNGKFKGSHT 106
           D  ++P DTT  I++ G  K   +
Sbjct: 347 DANILPTDTTLGIIIKGLCKAGRS 370



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  LI+G C    +++A ++L E+ G   +P+  +YN++I G     N++EA  L+ +M+
Sbjct: 462 YGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 521

Query: 177 DKGLVPDDTTYDILVNGKFKGS--------HTHAAA*FTQVRLMAYILLMDFLAN----E 34
           ++G+  D  TY  L++G  K          HT   +        A+ +L++ L N    E
Sbjct: 522 NEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFE 581

Query: 33  SCRKLLNGL 7
           + RK+L  +
Sbjct: 582 NARKILEDM 590



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/85 (31%), Positives = 44/85 (51%)
 Frame = -3

Query: 351 VLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEMLDK 172
           ++I GLC  G+      +  +       P+ + YNT+I G  KEGN+  A  ++ EM + 
Sbjct: 359 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV 418

Query: 171 GLVPDDTTYDILVNGKFKGSHTHAA 97
           G+ P   TY  L++G  KG++   A
Sbjct: 419 GITPSTVTYTSLIDGFCKGNNIDLA 443


>ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  142 bits (358), Expect = 3e-32
 Identities = 66/81 (81%), Positives = 74/81 (91%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           +TVLINGLCN GQ ENA K+L++M+G N  PSVL+YNTLIAGHFKEGNLQEAFRLHDEML
Sbjct: 685 HTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEML 744

Query: 177 DKGLVPDDTTYDILVNGKFKG 115
           D+GLVPD+ TYDILVNGKFKG
Sbjct: 745 DRGLVPDNITYDILVNGKFKG 765



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 27/80 (33%), Positives = 48/80 (60%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           +  L++ LC  G++  A  +  E+     +P+V+ YN +I GH ++ N+  A +++ EML
Sbjct: 370 FNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEML 429

Query: 177 DKGLVPDDTTYDILVNGKFK 118
           D G  P+  T+ IL++G FK
Sbjct: 430 DNGFTPNAVTFTILMDGYFK 449



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 29/84 (34%), Positives = 46/84 (54%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  +I G C    +  A KV KEM  N  TP+ + +  L+ G+FK+G+++ AF +   M 
Sbjct: 405 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 464

Query: 177 DKGLVPDDTTYDILVNGKFKGSHT 106
           D  ++P DTT  I++ G  K   +
Sbjct: 465 DANILPTDTTLGIIIKGLCKAGRS 488



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/129 (27%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  LI+G C    +++A ++L E+ G   +P+  +YN++I G     N++EA  L+ +M+
Sbjct: 580 YGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 639

Query: 177 DKGLVPDDTTYDILVNGKFKGS--------HTHAAA*FTQVRLMAYILLMDFLAN----E 34
           ++G+  D  TY  L++G  K          HT   +        A+ +L++ L N    E
Sbjct: 640 NEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFE 699

Query: 33  SCRKLLNGL 7
           + RK+L  +
Sbjct: 700 NARKILEDM 708



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/85 (31%), Positives = 44/85 (51%)
 Frame = -3

Query: 351 VLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEMLDK 172
           ++I GLC  G+      +  +       P+ + YNT+I G  KEGN+  A  ++ EM + 
Sbjct: 477 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV 536

Query: 171 GLVPDDTTYDILVNGKFKGSHTHAA 97
           G+ P   TY  L++G  KG++   A
Sbjct: 537 GITPSTVTYTSLIDGFCKGNNIDLA 561


>ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
            mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  138 bits (348), Expect = 4e-31
 Identities = 63/84 (75%), Positives = 74/84 (88%)
 Frame = -3

Query: 357  YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
            + VL+NGLCN GQLENA K+L+EMD  N TPSVL+YNTLIAG+F+EGNL+EAF LHDEML
Sbjct: 787  FHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEML 846

Query: 177  DKGLVPDDTTYDILVNGKFKGSHT 106
            D+GLVPDD TYDIL+NGKFKG  +
Sbjct: 847  DRGLVPDDVTYDILINGKFKGDRS 870



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/117 (31%), Positives = 60/117 (51%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y ++++ LC  G+++ A  +L  M      P+V+ YN +I GH ++GN+  A  +  +ML
Sbjct: 472 YNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDML 531

Query: 177 DKGLVPDDTTYDILVNGKFKGSHTHAAA*FTQVRLMAYILLMDFLANESCRKLLNGL 7
            + L P+  TY IL++G FK   +  A       L   I   DF  N     ++NGL
Sbjct: 532 ARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFN----TIINGL 584



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 31/87 (35%), Positives = 46/87 (52%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           +  +INGLC  GQ+  A   LK        PS + YN+++ G  KEGN+  A  ++ EM 
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636

Query: 177 DKGLVPDDTTYDILVNGKFKGSHTHAA 97
           + G+ P+  TY  L+NG  K +    A
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLA 663



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/80 (35%), Positives = 47/80 (58%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y  +I G C  G ++ A  V  +M   +  P+V+ Y+ LI G+FK+G+ ++A  L D+ML
Sbjct: 507 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566

Query: 177 DKGLVPDDTTYDILVNGKFK 118
              + P D T++ ++NG  K
Sbjct: 567 SLNIAPTDFTFNTIINGLCK 586



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/81 (39%), Positives = 48/81 (59%)
 Frame = -3

Query: 357 YTVLINGLCNHGQLENAGKVLKEMDGNNTTPSVLVYNTLIAGHFKEGNLQEAFRLHDEML 178
           Y+VLI G CN G +E A ++  +M  N   PSV   N+L+ G+ K    +EA +L DE +
Sbjct: 403 YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV 462

Query: 177 DKGLVPDDTTYDILVNGKFKG 115
           D G V +  TY+I+++   KG
Sbjct: 463 DCG-VANIFTYNIMMSWLCKG 482