BLASTX nr result

ID: Glycyrrhiza23_contig00032063 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032063
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   302   2e-80
ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   296   2e-78
ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...   283   1e-74
ref|XP_002307793.1| cholesterol transport protein [Populus trich...   277   6e-73
ref|XP_003545057.1| PREDICTED: niemann-Pick C1 protein-like [Gly...   269   2e-70

>ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1257

 Score =  302 bits (774), Expect = 2e-80
 Identities = 142/149 (95%), Positives = 146/149 (97%)
 Frame = +1

Query: 1   RHSEDYCAMYDICGKRIDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFD 180
           RHSEDYCAMYDICG R DGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQF+
Sbjct: 12  RHSEDYCAMYDICGTRSDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFE 71

Query: 181 TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDKVGGNLTVGGIDYF 360
           TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVD VGGNLTVGGIDYF
Sbjct: 72  TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDNVGGNLTVGGIDYF 131

Query: 361 VSDAFGEGLYESCKDVKFGTMNSRAMQFI 447
           V+DAFGEGLYESCK+VKFGTMNSRA+QFI
Sbjct: 132 VTDAFGEGLYESCKEVKFGTMNSRALQFI 160


>ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1283

 Score =  296 bits (757), Expect = 2e-78
 Identities = 139/149 (93%), Positives = 144/149 (96%)
 Frame = +1

Query: 1   RHSEDYCAMYDICGKRIDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFD 180
           RHSEDYCAMYDICG R DGKVVNCP+GSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQF+
Sbjct: 38  RHSEDYCAMYDICGTRSDGKVVNCPHGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFE 97

Query: 181 TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDKVGGNLTVGGIDYF 360
           TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVD V GN TVGGIDYF
Sbjct: 98  TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDNVSGNSTVGGIDYF 157

Query: 361 VSDAFGEGLYESCKDVKFGTMNSRAMQFI 447
           V+DAFGEGLYESCK+VKFGTMNSRA+QFI
Sbjct: 158 VTDAFGEGLYESCKEVKFGTMNSRALQFI 186


>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score =  283 bits (723), Expect = 1e-74
 Identities = 130/149 (87%), Positives = 141/149 (94%)
 Frame = +1

Query: 1   RHSEDYCAMYDICGKRIDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFD 180
           RHSE+YCAMYDICGKR DGKV+NCPYGSP+VKPDDLLSSKIQS+CPTI+GNVCCTEAQFD
Sbjct: 60  RHSEEYCAMYDICGKRSDGKVLNCPYGSPSVKPDDLLSSKIQSMCPTISGNVCCTEAQFD 119

Query: 181 TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDKVGGNLTVGGIDYF 360
           TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSV KV  NLTV GI++ 
Sbjct: 120 TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVSKVNNNLTVDGIEFI 179

Query: 361 VSDAFGEGLYESCKDVKFGTMNSRAMQFI 447
           ++DAFGEGLY SCKDVKFGTMN+RA+ FI
Sbjct: 180 ITDAFGEGLYNSCKDVKFGTMNTRAIDFI 208


>ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa]
           gi|222857242|gb|EEE94789.1| cholesterol transport
           protein [Populus trichocarpa]
          Length = 1274

 Score =  277 bits (709), Expect = 6e-73
 Identities = 128/149 (85%), Positives = 139/149 (93%)
 Frame = +1

Query: 1   RHSEDYCAMYDICGKRIDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFD 180
           RHSE+YCAMYDICG R DGKV+NCPYGSP+VKPDDLLS KIQSLCPTITGNVCC+EAQFD
Sbjct: 31  RHSEEYCAMYDICGAREDGKVLNCPYGSPSVKPDDLLSQKIQSLCPTITGNVCCSEAQFD 90

Query: 181 TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDKVGGNLTVGGIDYF 360
           TLR+QVQQAIPFLVGCPACLRNFLNLFCELTCSP+QS FINVT+  KV GNLTV GID++
Sbjct: 91  TLRSQVQQAIPFLVGCPACLRNFLNLFCELTCSPHQSTFINVTTTAKVKGNLTVSGIDFY 150

Query: 361 VSDAFGEGLYESCKDVKFGTMNSRAMQFI 447
            SDAFGEGLYESCKDVKFGTMN+RA+ FI
Sbjct: 151 ASDAFGEGLYESCKDVKFGTMNTRALNFI 179


>ref|XP_003545057.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
          Length = 1328

 Score =  269 bits (687), Expect = 2e-70
 Identities = 119/149 (79%), Positives = 137/149 (91%)
 Frame = +1

Query: 1   RHSEDYCAMYDICGKRIDGKVVNCPYGSPAVKPDDLLSSKIQSLCPTITGNVCCTEAQFD 180
           +HSE+YCAMYDICG+  DGK +NCPYGSP+VKPDDLLS+KIQSLCPTITGNVCCT  QFD
Sbjct: 72  KHSEEYCAMYDICGQSSDGKALNCPYGSPSVKPDDLLSAKIQSLCPTITGNVCCTADQFD 131

Query: 181 TLRTQVQQAIPFLVGCPACLRNFLNLFCELTCSPNQSLFINVTSVDKVGGNLTVGGIDYF 360
           TLR QVQQA+P LVGCPACLRNFLNLFCEL+CSPNQSLFINVTS+ +V GN+TV GIDY+
Sbjct: 132 TLRVQVQQAVPILVGCPACLRNFLNLFCELSCSPNQSLFINVTSISEVNGNMTVDGIDYY 191

Query: 361 VSDAFGEGLYESCKDVKFGTMNSRAMQFI 447
           +++ FGEGLYESCKDVKFGTMN+RA+ F+
Sbjct: 192 ITETFGEGLYESCKDVKFGTMNTRAIDFV 220


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