BLASTX nr result

ID: Glycyrrhiza23_contig00032049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032049
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|35551...   122   3e-26
ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]        97   1e-18
ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]     85   5e-15
gb|AFW68427.1| hypothetical protein ZEAMMB73_052095 [Zea mays]         69   4e-10

>ref|XP_003615478.1| MutS2 protein [Medicago truncatula] gi|355516813|gb|AES98436.1|
           MutS2 protein [Medicago truncatula]
          Length = 574

 Score =  122 bits (306), Expect = 3e-26
 Identities = 64/85 (75%), Positives = 68/85 (80%), Gaps = 5/85 (5%)
 Frame = +1

Query: 1   AESFSTRKDSSNGLLPNNTEWTLYLPKAYHPLLLQSHRENSQKAN-----VAALDKAQPQ 165
           AES  TR D+ NG LP+N EW LYLPKAYHPLLLQSHR N +K       V+ALDKAQPQ
Sbjct: 356 AESL-TRNDTLNGPLPDNREWILYLPKAYHPLLLQSHRANLKKVKEDVNIVSALDKAQPQ 414

Query: 166 PVPVDFLVPNKTRVIVITGPNTGGK 240
           PVPVDFLV NKTRVIVITGPNTGGK
Sbjct: 415 PVPVDFLVSNKTRVIVITGPNTGGK 439


>ref|XP_003518290.1| PREDICTED: mutS2 protein-like [Glycine max]
          Length = 792

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
 Frame = +1

Query: 1   AESFSTRKDSSNGLLPNNTEWTLYLPKAYHPLLLQSHRENSQKA----NVAALDKA--QP 162
           AE+F  R ++  G LP+  EWTLYL KAYHPLLLQ H+E  +KA    N+A  D A    
Sbjct: 349 AEAFLPRSENLYGPLPSKREWTLYLLKAYHPLLLQRHKEKLRKAKKNVNLATSDAALDNA 408

Query: 163 QPVPVDFLVPNKTRVIVITGPNTGGK 240
            PVPVDFLV  KTRVIVITGPNTGGK
Sbjct: 409 PPVPVDFLVSQKTRVIVITGPNTGGK 434


>ref|XP_002317849.1| predicted protein [Populus trichocarpa] gi|222858522|gb|EEE96069.1|
           predicted protein [Populus trichocarpa]
          Length = 864

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 45/87 (51%), Positives = 60/87 (68%), Gaps = 8/87 (9%)
 Frame = +1

Query: 4   ESFSTRKDSSNGLLPNNTEWTLYLPKAYHPLLLQSHRENSQKA--------NVAALDKAQ 159
           E++ +  ++     P   EW LY+PKAYHPL+LQ HR+N QKA        +V+ALD+A 
Sbjct: 406 ETYLSENETLMASFPKEREWLLYMPKAYHPLMLQQHRQNVQKAKKEGSNASDVSALDQA- 464

Query: 160 PQPVPVDFLVPNKTRVIVITGPNTGGK 240
            +PVPVDF + +KTRV+ ITGPNTGGK
Sbjct: 465 -RPVPVDFFISHKTRVLTITGPNTGGK 490


>ref|XP_002269872.2| PREDICTED: mutS2 protein-like [Vitis vinifera]
          Length = 791

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
 Frame = +1

Query: 28  SSNGLLPNNTEWTLYLPKAYHPLLLQSHRENSQKAN-------VAALDKAQPQPVPVDFL 186
           +S    P   EWTL+LPKAYHPLL+Q HREN QKA          +    Q  PVPVDF 
Sbjct: 357 TSEASYPIKREWTLHLPKAYHPLLVQQHRENLQKARKDVSLAISVSYVLEQSPPVPVDFF 416

Query: 187 VPNKTRVIVITGPNTGGK 240
           +  +TRV+VITGPNTGGK
Sbjct: 417 IAQRTRVLVITGPNTGGK 434


>gb|AFW68427.1| hypothetical protein ZEAMMB73_052095 [Zea mays]
          Length = 864

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 43/109 (39%), Positives = 52/109 (47%), Gaps = 36/109 (33%)
 Frame = +1

Query: 22  KDSSNGLLPNNTEWTLYLPKAYHPLLLQSHREN--------------------------- 120
           K  S+  LP    W LY+P AYHPLLLQ H+EN                           
Sbjct: 363 KQISSAQLPKKA-WKLYMPNAYHPLLLQRHQENIHRAKRDVASATAEIRRRRIYGQDIAE 421

Query: 121 ---------SQKANVAALDKAQPQPVPVDFLVPNKTRVIVITGPNTGGK 240
                    S K  V+ L+K   QPVPVDF++  +T V+VITGPNTGGK
Sbjct: 422 EDQLASDLDSMKLRVSQLEK--DQPVPVDFMIAEETTVLVITGPNTGGK 468


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