BLASTX nr result

ID: Glycyrrhiza23_contig00032009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032009
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   110   9e-23
ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicag...   104   9e-21
gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]       83   3e-14
ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like...    66   3e-09

>ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
           1-like [Glycine max]
          Length = 612

 Score =  110 bits (276), Expect = 9e-23
 Identities = 71/142 (50%), Positives = 82/142 (57%), Gaps = 7/142 (4%)
 Frame = +3

Query: 3   REMESQACGNLSHVLDNGVGTCADASR------CFIDITDDSXXXXXXXXXXXT-VVELA 161
           +EMESQACG L+HVLD  V TCADA         F+DI DDS           T VVEL 
Sbjct: 78  QEMESQACGTLTHVLDKTVDTCADADNDDASRSFFVDIVDDSPQPQRRKGKSHTNVVELD 137

Query: 162 SSDDDVDMDFTISRGKQHTPKSMDCRXXXXXXXXXXXXXXXXXXFTAKDRNSTLTYEELQ 341
           SSDD+ DM  ++SR K    +  D                    F ++D +S+ TYEELQ
Sbjct: 138 SSDDE-DMHCSVSREKPTVTQXFD---FIIIWSVSSTSSKMQSSFASRDTSSSPTYEELQ 193

Query: 342 ALDDIELANVVIFGNRTFRPLQ 407
           ALDDIELANVVIFGNRTFRPLQ
Sbjct: 194 ALDDIELANVVIFGNRTFRPLQ 215


>ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
           gi|355480249|gb|AES61452.1| Bloom syndrome protein-like
           protein [Medicago truncatula]
          Length = 603

 Score =  104 bits (259), Expect = 9e-21
 Identities = 67/134 (50%), Positives = 78/134 (58%)
 Frame = +3

Query: 6   EMESQACGNLSHVLDNGVGTCADASRCFIDITDDSXXXXXXXXXXXTVVELASSDDDVDM 185
           EMESQA G L+HVLD    T  D S+CFIDI DDS             VEL SSDD+ D 
Sbjct: 84  EMESQAVGTLNHVLD----TRGDGSKCFIDIIDDSPKKQGNKF-----VELGSSDDEEDT 134

Query: 186 DFTISRGKQHTPKSMDCRXXXXXXXXXXXXXXXXXXFTAKDRNSTLTYEELQALDDIELA 365
           +F +SR  QH    ++ R                    AKDRNSTL+YEEL+ LDDIELA
Sbjct: 135 NFDVSR-VQHPTNLVNGRKGITQGSVSSTSRKIKSS-AAKDRNSTLSYEELKTLDDIELA 192

Query: 366 NVVIFGNRTFRPLQ 407
           NVVIFGN++ RPLQ
Sbjct: 193 NVVIFGNKSLRPLQ 206


>gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 617

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 15/148 (10%)
 Frame = +3

Query: 9   MESQACGNLSHVLD------NGVGTCADASRCFIDITDDSXXXXXXXXXXXTVVEL-ASS 167
           +ES+ACG L+++ +      N      D SR +ID+TDDS           T +EL +SS
Sbjct: 77  IESEACGTLTNMFEEHVEKNNNKANDDDNSRTYIDVTDDSPEPKKTR----TFMELDSSS 132

Query: 168 DDDVDMDFTISRGKQH--TPK------SMDCRXXXXXXXXXXXXXXXXXXFTAKDRNSTL 323
           D + + DF++        TP       S+DC+                    +KD + +L
Sbjct: 133 DSEEEPDFSLEEENHDLFTPLTKRISGSLDCKSSVTQGSVSSVGNKRQCPRMSKDDHRSL 192

Query: 324 TYEELQALDDIELANVVIFGNRTFRPLQ 407
            YEELQALDD ELANVVIFGN+TFRPLQ
Sbjct: 193 NYEELQALDDFELANVVIFGNKTFRPLQ 220


>ref|XP_002330189.1| predicted protein [Populus trichocarpa] gi|222871645|gb|EEF08776.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 54/143 (37%), Positives = 73/143 (51%), Gaps = 10/143 (6%)
 Frame = +3

Query: 9   MESQACGNLSHVLD------NGVGTCADASRCFIDITDDSXXXXXXXXXXXTVVEL-ASS 167
           +ES+ACG L+++ +      N      D SR +ID+TDDS           T +EL +SS
Sbjct: 77  IESEACGTLTNMFEEHVVKNNNKANDDDNSRTYIDVTDDSPEPKKTR----TFMELDSSS 132

Query: 168 DDDVDMDFTISRG---KQHTPKSMDCRXXXXXXXXXXXXXXXXXXFTAKDRNSTLTYEEL 338
           D + + DF+       K+  P+                         +KD + +L YEEL
Sbjct: 133 DSEEEPDFSSVSSVGNKRQCPRM------------------------SKDDHRSLNYEEL 168

Query: 339 QALDDIELANVVIFGNRTFRPLQ 407
           QALDD ELANVVIFGN+TFRPLQ
Sbjct: 169 QALDDFELANVVIFGNKTFRPLQ 191


>ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
           sativus]
          Length = 601

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 53/145 (36%), Positives = 67/145 (46%), Gaps = 12/145 (8%)
 Frame = +3

Query: 9   MESQACGNLSHVLDNGVGTCADASR-----CFIDITDDSXXXXXXXXXXXTVVEL-ASSD 170
           MES+ACG L  +LD  V     A       C I+I +DS            +V + +SS+
Sbjct: 75  MESEACGALDIILDESVQEKDGAQNVHNRECPINIIEDSSEGEENP----NLVNIGSSSE 130

Query: 171 DDVDMDFTISR------GKQHTPKSMDCRXXXXXXXXXXXXXXXXXXFTAKDRNSTLTYE 332
            D D +F  S+      GK  T +                        T++    TLTYE
Sbjct: 131 SDEDANFNASKKRNLVQGKNSTTRGS----------VYSSPGERQYSRTSEAGRKTLTYE 180

Query: 333 ELQALDDIELANVVIFGNRTFRPLQ 407
           ELQ LDD ELANVVIFGN+ FRPLQ
Sbjct: 181 ELQTLDDFELANVVIFGNKAFRPLQ 205


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