BLASTX nr result

ID: Glycyrrhiza23_contig00032005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00032005
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547735.1| PREDICTED: AP-4 complex subunit epsilon-like...    99   3e-19
ref|XP_003547870.1| PREDICTED: AP-4 complex subunit epsilon-like...    97   2e-18
ref|XP_003516505.1| PREDICTED: AP-4 complex subunit epsilon-like...    93   2e-17
ref|XP_003534340.1| PREDICTED: AP-4 complex subunit epsilon-like...    92   4e-17
ref|XP_003629017.1| AP-4 complex subunit epsilon-1 [Medicago tru...    76   3e-12

>ref|XP_003547735.1| PREDICTED: AP-4 complex subunit epsilon-like [Glycine max]
          Length = 981

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/66 (74%), Positives = 53/66 (80%)
 Frame = +1

Query: 1    GDNVNLLCELSNAAVRATNGEINVTPLSQSMKGPNAKDYLEKDALVKLMGVNPSIQNPNL 180
            GDNVN+L ELSNAA R T GE   TPLSQS+KGPN KD L+KDA V+ MGV PS QNPNL
Sbjct: 916  GDNVNILSELSNAAARGTTGETTATPLSQSVKGPNVKDSLQKDAKVRQMGVTPSGQNPNL 975

Query: 181  FSDLLG 198
            FSDLLG
Sbjct: 976  FSDLLG 981


>ref|XP_003547870.1| PREDICTED: AP-4 complex subunit epsilon-like [Glycine max]
          Length = 981

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/66 (74%), Positives = 52/66 (78%)
 Frame = +1

Query: 1    GDNVNLLCELSNAAVRATNGEINVTPLSQSMKGPNAKDYLEKDALVKLMGVNPSIQNPNL 180
            GDNVNLL E SNAA R T  E  VTPLSQS+KGPN KD L+KDA V+ MGV PS QNPNL
Sbjct: 916  GDNVNLLSEFSNAAARGTTVETTVTPLSQSVKGPNVKDSLQKDAKVRKMGVTPSGQNPNL 975

Query: 181  FSDLLG 198
            FSDLLG
Sbjct: 976  FSDLLG 981


>ref|XP_003516505.1| PREDICTED: AP-4 complex subunit epsilon-like [Glycine max]
          Length = 1026

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 49/66 (74%), Positives = 54/66 (81%)
 Frame = +1

Query: 1    GDNVNLLCELSNAAVRATNGEINVTPLSQSMKGPNAKDYLEKDALVKLMGVNPSIQNPNL 180
            G +VNLL ELSNAA +AT+GE  VT L QS+ G NAKD LEKDALV+ MGVNPS QNPNL
Sbjct: 961  GYDVNLLSELSNAAAKATSGETIVTSLPQSIMGRNAKDSLEKDALVRQMGVNPSSQNPNL 1020

Query: 181  FSDLLG 198
            FSDLLG
Sbjct: 1021 FSDLLG 1026


>ref|XP_003534340.1| PREDICTED: AP-4 complex subunit epsilon-like [Glycine max]
          Length = 967

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 48/66 (72%), Positives = 53/66 (80%)
 Frame = +1

Query: 1    GDNVNLLCELSNAAVRATNGEINVTPLSQSMKGPNAKDYLEKDALVKLMGVNPSIQNPNL 180
            G +VNLL ELSNAA +AT  E  V PL QS+KGP+AKD LEKDALV+ MGV PS QNPNL
Sbjct: 902  GYDVNLLSELSNAATKATREETIVKPLPQSIKGPDAKDSLEKDALVRQMGVKPSSQNPNL 961

Query: 181  FSDLLG 198
            FSDLLG
Sbjct: 962  FSDLLG 967


>ref|XP_003629017.1| AP-4 complex subunit epsilon-1 [Medicago truncatula]
            gi|355523039|gb|AET03493.1| AP-4 complex subunit
            epsilon-1 [Medicago truncatula]
          Length = 1018

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/63 (66%), Positives = 48/63 (76%), Gaps = 1/63 (1%)
 Frame = +1

Query: 13   NLLCELSNAA-VRATNGEINVTPLSQSMKGPNAKDYLEKDALVKLMGVNPSIQNPNLFSD 189
            +LL  LSNAA VR T GE   +P+SQS+KG NAKD LEKDA V+ MGV P+ QNPNLF D
Sbjct: 956  DLLSGLSNAAAVRGTTGETIPSPVSQSVKGANAKDSLEKDAKVRQMGVTPTGQNPNLFRD 1015

Query: 190  LLG 198
            LLG
Sbjct: 1016 LLG 1018


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