BLASTX nr result

ID: Glycyrrhiza23_contig00031489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031489
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_002440983.1| hypothetical protein SORBIDRAFT_09g018390 [S...    65   4e-09
gb|EEE63475.1| hypothetical protein OsJ_18289 [Oryza sativa Japo...    65   8e-09
ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group] g...    65   8e-09
ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containi...    64   1e-08

>ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 727

 Score =  108 bits (270), Expect = 5e-22
 Identities = 54/84 (64%), Positives = 65/84 (77%)
 Frame = -3

Query: 254 MYLESCELYVRMVNMGLTTNGVVATSVLPAXXXXXXXXXXKELHSFVLKEGLLSDVVVGS 75
           +Y ES +LY+ M+N+GL TN +VATSVLPA          KE+H+FVLKEGL+SDVVVGS
Sbjct: 314 LYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGS 373

Query: 74  ALVDMYANCGSIREPELIFECISD 3
           AL+ MYANCGSI+E E IFEC SD
Sbjct: 374 ALIVMYANCGSIKEAESIFECTSD 397


>ref|XP_002440983.1| hypothetical protein SORBIDRAFT_09g018390 [Sorghum bicolor]
           gi|241946268|gb|EES19413.1| hypothetical protein
           SORBIDRAFT_09g018390 [Sorghum bicolor]
          Length = 454

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/83 (40%), Positives = 45/83 (54%)
 Frame = -3

Query: 257 GMYLESCELYVRMVNMGLTTNGVVATSVLPAXXXXXXXXXXKELHSFVLKEGLLSDVVVG 78
           G  LE+ EL+  M   G+  N V    VLPA          +  HSF L++G L DV V 
Sbjct: 272 GKDLEAVELFREMQAQGIEPNSVTIPCVLPAFANVAALTHGRSAHSFALRKGFLHDVYVS 331

Query: 77  SALVDMYANCGSIREPELIFECI 9
           SALVDMYA CG +++   IF+ +
Sbjct: 332 SALVDMYAKCGRVKDARTIFDAM 354


>gb|EEE63475.1| hypothetical protein OsJ_18289 [Oryza sativa Japonica Group]
          Length = 490

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/83 (39%), Positives = 46/83 (55%)
 Frame = -3

Query: 257 GMYLESCELYVRMVNMGLTTNGVVATSVLPAXXXXXXXXXXKELHSFVLKEGLLSDVVVG 78
           G  LE+ +L+  M + G+  N V    VLPA          +  H F L++G   D+ VG
Sbjct: 271 GRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVG 330

Query: 77  SALVDMYANCGSIREPELIFECI 9
           SALVDMYA CG +R+  +IFE +
Sbjct: 331 SALVDMYAKCGRVRDARMIFEAM 353


>ref|NP_001055349.1| Os05g0370000 [Oryza sativa Japonica Group]
           gi|54287484|gb|AAV31228.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578900|dbj|BAF17263.1|
           Os05g0370000 [Oryza sativa Japonica Group]
          Length = 664

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 33/83 (39%), Positives = 46/83 (55%)
 Frame = -3

Query: 257 GMYLESCELYVRMVNMGLTTNGVVATSVLPAXXXXXXXXXXKELHSFVLKEGLLSDVVVG 78
           G  LE+ +L+  M + G+  N V    VLPA          +  H F L++G   D+ VG
Sbjct: 271 GRDLEAVDLFREMQSEGIEPNSVTIPCVLPAFANIAALMHGRSAHCFSLRKGFHHDIYVG 330

Query: 77  SALVDMYANCGSIREPELIFECI 9
           SALVDMYA CG +R+  +IFE +
Sbjct: 331 SALVDMYAKCGRVRDARMIFEAM 353


>ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 34/83 (40%), Positives = 45/83 (54%)
 Frame = -3

Query: 257 GMYLESCELYVRMVNMGLTTNGVVATSVLPAXXXXXXXXXXKELHSFVLKEGLLSDVVVG 78
           G  LE+ +L+  M ++G+  N V    VLPA          +  H F L++G L DV VG
Sbjct: 268 GRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVG 327

Query: 77  SALVDMYANCGSIREPELIFECI 9
           SALVDMYA CG  R    IF+ +
Sbjct: 328 SALVDMYAKCGKARHARTIFDAM 350


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