BLASTX nr result

ID: Glycyrrhiza23_contig00031409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031409
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522549.1| PREDICTED: ethylene-responsive transcription...    73   3e-11
ref|XP_003527973.1| PREDICTED: ethylene-responsive transcription...    71   1e-10
ref|XP_002513597.1| Ethylene-responsive transcription factor, pu...    63   2e-08
ref|XP_002331847.1| AP2/ERF domain-containing transcription fact...    63   3e-08
ref|XP_003602186.1| Ethylene responsive transcription factor 1a ...    62   5e-08

>ref|XP_003522549.1| PREDICTED: ethylene-responsive transcription factor CRF1-like
           [Glycine max]
          Length = 324

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/76 (53%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
 Frame = +3

Query: 42  MDQSILCKYTVHQSVTKKFTKPKK---LXXXXXXXXXXXXXXXXXPDATDSSSDEEGECP 212
           M+ SILCK+TVH+SVTKK   PKK                     PDATDSSSDEEG   
Sbjct: 1   MEDSILCKHTVHRSVTKKLISPKKSSQTNSSTQTERRIVRISYTDPDATDSSSDEEGFPL 60

Query: 213 SRRRLKRYVNQIDIET 260
            R+R+KRYVNQI+IET
Sbjct: 61  VRKRMKRYVNQIEIET 76


>ref|XP_003527973.1| PREDICTED: ethylene-responsive transcription factor CRF4-like
           [Glycine max]
          Length = 353

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 40/74 (54%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = +3

Query: 42  MDQSILCKYTVHQSVTKKFTKPKKLXXXXXXXXXXXXXXXXX-PDATDSSSDEEGECPSR 218
           M+ SILCK+TVH +VTKK   PKK                   PDATDSSSDEEG    R
Sbjct: 1   MEDSILCKHTVHHTVTKKLISPKKSSQTNSTTERRIVRISYTDPDATDSSSDEEGFPFVR 60

Query: 219 RRLKRYVNQIDIET 260
           +R+KRYVNQI+IET
Sbjct: 61  QRMKRYVNQIEIET 74


>ref|XP_002513597.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223547505|gb|EEF49000.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 309

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
 Frame = +3

Query: 42  MDQSILC--KYTVHQSVTKKFTKP-----------KKLXXXXXXXXXXXXXXXXXPDATD 182
           +DQSILC  K+T H+ +TKK+TKP           +                   PDATD
Sbjct: 2   LDQSILCPMKFTEHKRITKKYTKPSLKPKKPSSDERSSCRLEHIPPRVVRISVTDPDATD 61

Query: 183 SSSDEEGECPSRRRLKRYVNQIDIE 257
           SSSDEE E  SR+R+KRYVN+I IE
Sbjct: 62  SSSDEEDELFSRQRVKRYVNEISIE 86


>ref|XP_002331847.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222875085|gb|EEF12216.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 363

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 39/86 (45%), Positives = 47/86 (54%), Gaps = 14/86 (16%)
 Frame = +3

Query: 42  MDQSILC--KYTVHQSVTKKFTKPK------------KLXXXXXXXXXXXXXXXXXPDAT 179
           +DQSILC  KYT H+ VTK+FTKP             +L                  DAT
Sbjct: 2   IDQSILCPIKYTEHKKVTKQFTKPSLKPKKLPSDDRCRLLEPSNPQPRLVRVTVTDHDAT 61

Query: 180 DSSSDEEGECPSRRRLKRYVNQIDIE 257
           DSSSDEEG    R+R+KRYVN+IDI+
Sbjct: 62  DSSSDEEGGLFGRQRVKRYVNEIDIQ 87


>ref|XP_003602186.1| Ethylene responsive transcription factor 1a [Medicago truncatula]
           gi|355491234|gb|AES72437.1| Ethylene responsive
           transcription factor 1a [Medicago truncatula]
          Length = 355

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 37/77 (48%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
 Frame = +3

Query: 48  QSILCKYTVHQSVTKKFTKPKK-----LXXXXXXXXXXXXXXXXXPDATDSSSDEEGECP 212
           QSILCKYT H++VTKK    KK                       PDATDSSSDEEG+  
Sbjct: 4   QSILCKYTEHETVTKKLITTKKNGHSNNNNNTTINPRVVRISVTDPDATDSSSDEEGQIQ 63

Query: 213 S-RRRLKRYVNQIDIET 260
           + R R KRY+N+I+IET
Sbjct: 64  TFRNRTKRYINRIEIET 80


Top