BLASTX nr result

ID: Glycyrrhiza23_contig00031385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031385
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   116   2e-24
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   115   3e-24
ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   114   6e-24
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              114   6e-24
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   109   2e-22

>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1868

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/89 (67%), Positives = 66/89 (74%)
 Frame = +2

Query: 137 MIAKANKLMEKITSAPDNPKPTVLHALSSIIEIQESRYMXXXXXXXXXXXXXXXXVGRLG 316
           +IAK NKLMEKITSAPDNP  TVLHAL+SI+E QESRYM                +GRLG
Sbjct: 25  LIAKVNKLMEKITSAPDNPNATVLHALASILEAQESRYMEENGHSSSSTARAAHIIGRLG 84

Query: 317 SLIRENDEFFELISSNFLSETRYTTSVQA 403
            LIRENDEFFELISS FL ETRY+TS+QA
Sbjct: 85  GLIRENDEFFELISSKFLLETRYSTSIQA 113


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
           max]
          Length = 1857

 Score =  115 bits (289), Expect = 3e-24
 Identities = 60/89 (67%), Positives = 66/89 (74%)
 Frame = +2

Query: 137 MIAKANKLMEKITSAPDNPKPTVLHALSSIIEIQESRYMXXXXXXXXXXXXXXXXVGRLG 316
           +IAK NKLMEKITSAPDNP  TVLHAL+SI+E QESRYM                +GRLG
Sbjct: 23  VIAKVNKLMEKITSAPDNPNATVLHALASILEAQESRYMEENGHSSSITARAAHIIGRLG 82

Query: 317 SLIRENDEFFELISSNFLSETRYTTSVQA 403
            LIRENDEFFELISS FL ETRY+TS+QA
Sbjct: 83  GLIRENDEFFELISSKFLLETRYSTSIQA 111


>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
           vinifera]
          Length = 2024

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/132 (48%), Positives = 76/132 (57%)
 Frame = +2

Query: 8   QAPPPPRAPESQSHDGVGXXXXXXXXXXXXXXXXXXXXXXXXXMIAKANKLMEKITSAPD 187
           QAPPPP +P  Q  D                            + +K  KLMEKITS+PD
Sbjct: 150 QAPPPPSSPPIQEEDS----------------------GDDDSLQSKVQKLMEKITSSPD 187

Query: 188 NPKPTVLHALSSIIEIQESRYMXXXXXXXXXXXXXXXXVGRLGSLIRENDEFFELISSNF 367
           NP P+VLHALSSI+E QESRYM                +GRLGSL+R+ND+FFELISS F
Sbjct: 188 NPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGRLGSLVRDNDDFFELISSKF 247

Query: 368 LSETRYTTSVQA 403
           LSE+RY+ SVQA
Sbjct: 248 LSESRYSISVQA 259


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/132 (48%), Positives = 76/132 (57%)
 Frame = +2

Query: 8   QAPPPPRAPESQSHDGVGXXXXXXXXXXXXXXXXXXXXXXXXXMIAKANKLMEKITSAPD 187
           QAPPPP +P  Q  D                            + +K  KLMEKITS+PD
Sbjct: 16  QAPPPPSSPPIQEEDS----------------------GDDDSLQSKVQKLMEKITSSPD 53

Query: 188 NPKPTVLHALSSIIEIQESRYMXXXXXXXXXXXXXXXXVGRLGSLIRENDEFFELISSNF 367
           NP P+VLHALSSI+E QESRYM                +GRLGSL+R+ND+FFELISS F
Sbjct: 54  NPNPSVLHALSSILETQESRYMEETGHSSLNNGRATHIIGRLGSLVRDNDDFFELISSKF 113

Query: 368 LSETRYTTSVQA 403
           LSE+RY+ SVQA
Sbjct: 114 LSESRYSISVQA 125


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
           gi|223532632|gb|EEF34418.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1871

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/89 (60%), Positives = 67/89 (75%)
 Frame = +2

Query: 137 MIAKANKLMEKITSAPDNPKPTVLHALSSIIEIQESRYMXXXXXXXXXXXXXXXXVGRLG 316
           ++ KA KLM++ITS+PDNP PTVLHALSS++E QES YM                +GRLG
Sbjct: 48  LMDKAQKLMDRITSSPDNPNPTVLHALSSLLEAQESLYMEKNGYSSFNNSRASHNIGRLG 107

Query: 317 SLIRENDEFFELISSNFLSETRYTTSVQA 403
           +L+RENDEFF+LIS+ FLSETRY+TSVQA
Sbjct: 108 NLVRENDEFFDLISTKFLSETRYSTSVQA 136


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