BLASTX nr result

ID: Glycyrrhiza23_contig00031380 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031380
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatu...    60   2e-07
ref|XP_002531465.1| conserved hypothetical protein [Ricinus comm...    58   7e-07
emb|CBI29503.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|222833983|gb|EEE72460.1|
           predicted protein [Populus trichocarpa]
          Length = 563

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 41/86 (47%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
 Frame = +2

Query: 20  SDSVVSRFLQVXXXXXXXXXXXXXXXXXYSKLQTWSIQHRRNKPTVVVAPQHSGFD---- 187
           + S VSRFLQV                  +K+QTWS Q+ RN P VVVA Q+S  D    
Sbjct: 98  AQSYVSRFLQVSSVFDDEVDSPPESEE--TKVQTWSNQYYRNDPVVVVAEQNSALDKEQR 155

Query: 188 -------EKPLLLPVRSLKSRVSDSD 244
                  EKPLLLPVRSLKSRV D+D
Sbjct: 156 ATSSRIGEKPLLLPVRSLKSRVIDAD 181


>ref|XP_003608671.1| Glycoprotein-like protein [Medicago truncatula]
           gi|355509726|gb|AES90868.1| Glycoprotein-like protein
           [Medicago truncatula]
          Length = 483

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 44/98 (44%), Positives = 52/98 (53%), Gaps = 17/98 (17%)
 Frame = +2

Query: 20  SDSVVSRFLQVXXXXXXXXXXXXXXXXX-YSKLQTWSIQ--HRRNKPTVVVAPQ------ 172
           + S+VSRFLQV                   +K+QTWS Q  H RNKP V+VAPQ      
Sbjct: 105 AQSLVSRFLQVSSFFEDEVDHQNQSESEDINKIQTWSNQNQHYRNKPMVIVAPQVQQLQN 164

Query: 173 ------HSGFDE--KPLLLPVRSLKSRVSDSDPAVEYQ 262
                  S F+E  KPLLLPVRSLKS +SD D  V+ Q
Sbjct: 165 SVFEDEQSSFNENEKPLLLPVRSLKSLLSDDDCVVQSQ 202


>ref|XP_002531465.1| conserved hypothetical protein [Ricinus communis]
           gi|223528919|gb|EEF30915.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 40/88 (45%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
 Frame = +2

Query: 20  SDSVVSRFLQVXXXXXXXXXXXXXXXXXYS-KLQTWSIQHRRNKPTVVVAP-QHSGFD-- 187
           + S VSRFLQV                  S  +QTW+ Q+ RN+P VVVA  QH  FD  
Sbjct: 101 AQSYVSRFLQVSSVFDDDADSPSKSDVSNSTSVQTWNNQYYRNEPVVVVAEEQHPAFDQE 160

Query: 188 ---------EKPLLLPVRSLKSRVSDSD 244
                    EKPLLLP+RSLKSRV D+D
Sbjct: 161 QRSTGSRIGEKPLLLPIRSLKSRVLDAD 188


>emb|CBI29503.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/83 (46%), Positives = 44/83 (53%), Gaps = 10/83 (12%)
 Frame = +2

Query: 20  SDSVVSRFLQVXXXXXXXXXXXXXXXXXYSKLQTWSIQHRRNKPTVVVAPQHSGFDE--- 190
           + S VSRFLQV                  SK+QTW+ Q+ R KP VVV  + S  DE   
Sbjct: 90  AQSYVSRFLQVSSVFDEEVESPSGSGE--SKVQTWNSQYYRGKPVVVVTQESSVIDEQSS 147

Query: 191 -------KPLLLPVRSLKSRVSD 238
                  KPLLLPVRSLKSRVSD
Sbjct: 148 KGSRIGEKPLLLPVRSLKSRVSD 170


>ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|222841726|gb|EEE79273.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 40/86 (46%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
 Frame = +2

Query: 20  SDSVVSRFLQVXXXXXXXXXXXXXXXXXYSKLQTWSIQHRRNKPTVVVAPQHSGFD---- 187
           + S VSRFLQV                  +K+QTWS Q+ RN P VVVA Q+S  D    
Sbjct: 99  AQSYVSRFLQVSSVFDDDVDSSPKSGE--TKVQTWSNQYYRNDPVVVVAEQNSVLDKEQR 156

Query: 188 -------EKPLLLPVRSLKSRVSDSD 244
                  EKPLLLPVRSLKSRV  +D
Sbjct: 157 ATSSRIGEKPLLLPVRSLKSRVIAAD 182


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