BLASTX nr result

ID: Glycyrrhiza23_contig00031370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031370
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_052806.1| hypothetical protein OrniCp080 [Oryza nivara] g...    64   1e-08
prf||1603356CM trnA intron ORF 109                                     64   1e-08
ref|NP_043080.1| hypothetical protein ZemaCp157 [Zea mays] gi|11...    61   1e-07
gb|ABP35455.1| ORF43n [Pinus koraiensis]                               55   4e-06

>ref|YP_052806.1| hypothetical protein OrniCp080 [Oryza nivara]
           gi|50234049|ref|YP_052826.1| hypothetical protein
           OrniCp100 [Oryza nivara] gi|82517|pir||JQ0280
           hypothetical 12K protein (trnA intron) - rice
           chloroplast gi|49615053|dbj|BAD26836.1| unnamed protein
           product [Oryza nivara] gi|49615073|dbj|BAD26856.1|
           unnamed protein product [Oryza nivara]
          Length = 109

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
 Frame = -3

Query: 179 EILRRVALWRAQYDESCKLCSGG-YCLSLASM 87
           EILRRVALWRAQYDESCKLCSGG YCLSLASM
Sbjct: 71  EILRRVALWRAQYDESCKLCSGGSYCLSLASM 102


>prf||1603356CM trnA intron ORF 109
          Length = 109

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 31/32 (96%), Positives = 31/32 (96%), Gaps = 1/32 (3%)
 Frame = -3

Query: 179 EILRRVALWRAQYDESCKLCSGG-YCLSLASM 87
           EILRRVALWRAQYDESCKLCSGG YCLSLASM
Sbjct: 71  EILRRVALWRAQYDESCKLCSGGSYCLSLASM 102


>ref|NP_043080.1| hypothetical protein ZemaCp157 [Zea mays]
           gi|11467265|ref|NP_043097.1| hypothetical protein
           ZemaCp158 [Zea mays] gi|48478724|ref|YP_024331.1|
           hypothetical protein 49 [Saccharum hybrid cultivar
           SP-80-3280] gi|48478741|ref|YP_024348.1| hypothetical
           protein 49 [Saccharum hybrid cultivar SP-80-3280]
           gi|50812587|ref|YP_054688.1| hypothetical protein
           SaofCp082 [Saccharum hybrid cultivar NCo 310]
           gi|50812604|ref|YP_054705.1| hypothetical protein
           SaofCp099 [Saccharum hybrid cultivar NCo 310]
           gi|260677395|ref|YP_003208243.1| hypothetical protein
           ColajoC_p081 [Coix lacryma-jobi]
           gi|260677398|ref|YP_003208258.1| hypothetical protein
           ColajoC_p096 [Coix lacryma-jobi]
           gi|902277|emb|CAA60342.1| hypothetical protein [Zea
           mays] gi|902294|emb|CAA60358.1| hypothetical protein
           [Zea mays] gi|19743726|gb|AAL92455.1| hypothetical
           protein [Saccharum hybrid cultivar SP80-3280]
           gi|48478626|gb|AAT44646.1| hypothetical protein 49
           [Saccharum hybrid cultivar SP80-3280]
           gi|48478643|gb|AAT44663.1| hypothetical protein 49
           [Saccharum hybrid cultivar SP80-3280]
           gi|49659571|dbj|BAD27352.1| hypothetical protein
           [Saccharum hybrid cultivar NCo 310]
           gi|49659588|dbj|BAD27369.1| hypothetical protein
           [Saccharum hybrid cultivar NCo 310]
           gi|209361333|gb|ACI43248.1| unknown [Coix lacryma-jobi]
           gi|209361336|gb|ACI43251.1| unknown [Coix lacryma-jobi]
          Length = 49

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 29/31 (93%), Positives = 30/31 (96%), Gaps = 1/31 (3%)
 Frame = -3

Query: 176 ILRRVALWRAQYDESCKLCSGG-YCLSLASM 87
           ILRRVALWRAQYDESCKLCSGG YCLSL+SM
Sbjct: 12  ILRRVALWRAQYDESCKLCSGGSYCLSLSSM 42


>gb|ABP35455.1| ORF43n [Pinus koraiensis]
          Length = 43

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/28 (92%), Positives = 27/28 (96%), Gaps = 1/28 (3%)
 Frame = -3

Query: 167 RVALWRAQYDESCKLCSGG-YCLSLASM 87
           RVALWRAQYDESC+LCSGG YCLSLASM
Sbjct: 9   RVALWRAQYDESCELCSGGSYCLSLASM 36


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