BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031290
         (737 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]               94   4e-17
sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr...    94   4e-17
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    93   5e-17
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...    91   3e-16
gb|AAD22368.1| putative non-LTR retroelement reverse transcripta...    87   4e-15

>gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana]
          Length = 1055

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
 Frame = +2

Query: 134 KDGCFSNNSAYESMLDPSLLTRN--DIYNLAWRWSGPERYRVFLWKLSQDAIVTNLFRFK 307
           +DG FS  SAYE +    +   N    +N  W+   PER + FLW +   A++T   R +
Sbjct: 370 QDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHR 429

Query: 308 RGIAESSLCPVCASGEESILHLLRDYDLANQVWLYLSENRINLGFYSEELLPWITLNVKE 487
           R ++ S++C VC  G ES+LH+LRD      +W+ +   R   GF+S+ L  W+  N+ +
Sbjct: 430 RHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGD 489

Query: 488 DMMVRGCQWNLIFVVALLLSWQARNALIFEGKRTNGVEVGKKAICQAAAIQSCHPDRIGL 667
                   W+ IF V +   W+ R   IF G+ T   +  K     A  +   H   + +
Sbjct: 490 RSGCEDIPWSTIFAVIIWWGWKWRCGNIF-GENTKCRDRVKFVKEWAVEVYRAHSGNVLV 548

Query: 668 GKLSRHSTPMGHIRWVAP 721
           G        M  I WV+P
Sbjct: 549 GITQPRVERM--IGWVSP 564


>sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750
          Length = 620

 Score = 93.6 bits (231), Expect = 4e-17
 Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 2/198 (1%)
 Frame = +2

Query: 134 KDGCFSNNSAYESMLDPSLLTRN--DIYNLAWRWSGPERYRVFLWKLSQDAIVTNLFRFK 307
           +DG FS  SAYE +    +   N    +N  W+   PER + FLW +   A++T   R +
Sbjct: 261 QDGQFSVRSAYEMLTVDEVPRPNMASFFNCLWKVRVPERVKTFLWLVGNQAVMTEEERHR 320

Query: 308 RGIAESSLCPVCASGEESILHLLRDYDLANQVWLYLSENRINLGFYSEELLPWITLNVKE 487
           R ++ S++C VC  G ES+LH+LRD      +W+ +   R   GF+S+ L  W+  N+ +
Sbjct: 321 RHLSASNVCQVCKGGVESMLHVLRDCPAQLGIWVRVVPQRRQQGFFSKSLFEWLYDNLGD 380

Query: 488 DMMVRGCQWNLIFVVALLLSWQARNALIFEGKRTNGVEVGKKAICQAAAIQSCHPDRIGL 667
                   W+ IF V +   W+ R   IF G+ T   +  K     A  +   H   + +
Sbjct: 381 RSGCEDIPWSTIFAVIIWWGWKWRCGNIF-GENTKCRDRVKFVKEWAVEVYRAHSGNVLV 439

Query: 668 GKLSRHSTPMGHIRWVAP 721
           G        M  I WV+P
Sbjct: 440 GITQPRVERM--IGWVSP 455


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 3/167 (1%)
 Frame = +2

Query: 134  KDGCFSNNSAYESMLDPSLLTRNDI---YNLAWRWSGPERYRVFLWKLSQDAIVTNLFRF 304
            +DG F+  SAY S+L   +  R ++   +N  W+   PER RVF+W +SQ+ I+TN+ R 
Sbjct: 876  QDGAFTVRSAY-SLLQGDVGDRPNMGSFFNRIWKLITPERVRVFIWLVSQNVIMTNVERV 934

Query: 305  KRGIAESSLCPVCASGEESILHLLRDYDLANQVWLYLSENRINLGFYSEELLPWITLNVK 484
            +R ++E+++C VC   EE+ILH+LRD      +W  L   R +  F+S+ LL W+  N+ 
Sbjct: 935  RRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRRHHEFFSQSLLEWLFTNMD 994

Query: 485  EDMMVRGCQWNLIFVVALLLSWQARNALIFEGKRTNGVEVGKKAICQ 625
                V+G  W  +F + +  +W+ R   +F          G++ IC+
Sbjct: 995  P---VKGI-WPTLFGMGIWWAWKWRCCDVF----------GERKICR 1027


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 57/198 (28%), Positives = 97/198 (48%), Gaps = 3/198 (1%)
 Frame = +2

Query: 137  DGCFSNNSAYESMLDPSLLTRNDI---YNLAWRWSGPERYRVFLWKLSQDAIVTNLFRFK 307
            DG F+  SAY S++  +   R+D+   Y+  W+   PER ++FLW      I+TN+ R +
Sbjct: 441  DGKFTVKSAYSSLMKDNT-PRSDLSRMYDRVWKVIAPERVKIFLWLGVHQVIMTNMERQR 499

Query: 308  RGIAESSLCPVCASGEESILHLLRDYDLANQVWLYLSENRINLGFYSEELLPWITLNVKE 487
            R ++++ +C VC  G+E+I+H+LRD      +W  +   R    F+++ LL W+  N+ +
Sbjct: 500  RHLSDTGICQVCKGGDETIIHILRDCPAMYGIWTRIIPRRKRGTFFTQTLLEWVYDNLGD 559

Query: 488  DMMVRGCQWNLIFVVALLLSWQARNALIFEGKRTNGVEVGKKAICQAAAIQSCHPDRIGL 667
               V GC W+    V     W+  N     GK  + V+  +    +A+ +   H      
Sbjct: 560  SGKVDGCPWS---CVRWGWKWRCGNVFGVNGKCRDMVKFVRD---RASEVIQAHLVEGNS 613

Query: 668  GKLSRHSTPMGHIRWVAP 721
            GK+      M  + WV P
Sbjct: 614  GKIRGRIERM--VSWVKP 629


>gb|AAD22368.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 321

 Score = 87.0 bits (214), Expect = 4e-15
 Identities = 55/163 (33%), Positives = 83/163 (50%)
 Frame = +2

Query: 236 PERYRVFLWKLSQDAIVTNLFRFKRGIAESSLCPVCASGEESILHLLRDYDLANQVWLYL 415
           PER RVFLW + Q  I+TN+ R++R ++++ +C +C  GEE+ILH+LRD      +W  L
Sbjct: 3   PERVRVFLWLVVQQVIITNVERYRRHLSDTRVCQICQGGEETILHVLRDCPAMAGIWSRL 62

Query: 416 SENRINLGFYSEELLPWITLNVKEDMMVRGCQWNLIFVVALLLSWQARNALIFEGKRTNG 595
                   F++  LL WI  N++E    RG  W  +FV+A+   W+ R   IF G   NG
Sbjct: 63  VPRDQIRQFFTASLLEWIYKNLRE----RG-SWPTVFVMAVWWGWKWRCGNIFGG---NG 114

Query: 596 VEVGKKAICQAAAIQSCHPDRIGLGKLSRHSTPMGHIRWVAPE 724
               +    +  A +    +    G   R S     + WV+PE
Sbjct: 115 KCRDRVKFIKDLAEEVAIANAFVKGNEVRVSRVERLVSWVSPE 157