BLASTX nr result

ID: Glycyrrhiza23_contig00031258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031258
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|3555...    65   8e-09
ref|XP_003628780.1| F-box family protein [Medicago truncatula] g...    64   1e-08
gb|AFK38351.1| unknown [Medicago truncatula]                           61   8e-08
ref|XP_003621679.1| F-box/LRR-repeat protein [Medicago truncatul...    60   1e-07
ref|XP_003597759.1| F-box/LRR-repeat protein [Medicago truncatul...    60   1e-07

>ref|XP_003617104.1| F-box family-9 [Medicago truncatula] gi|355518439|gb|AET00063.1|
           F-box family-9 [Medicago truncatula]
          Length = 402

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/103 (33%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = -1

Query: 314 QPQVFTNLIQYVVLHSVKHLKIIVPYNLG-LPNCVYSCQXXXXXXXXXXXXXSKRRTRIP 138
           QP++  +++ Y + H+++ L++ V  ++  +P  V+SCQ                +T  P
Sbjct: 107 QPRIIKSVVNYAISHNIQRLRLYVGCHIAQIPPSVFSCQTLTHLELYFG-----EQTLFP 161

Query: 137 KCMDLPALRSLHLEWVGISADNIGHAEPFSACKKLNTLYLDDC 9
           K ++LP+L SL+L+     AD  G AEPFSA  +LN+L+L  C
Sbjct: 162 KSLNLPSLTSLYLKNFAFCADENGRAEPFSAFNRLNSLFLCGC 204


>ref|XP_003628780.1| F-box family protein [Medicago truncatula]
           gi|355522802|gb|AET03256.1| F-box family protein
           [Medicago truncatula]
          Length = 451

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
 Frame = -1

Query: 323 GYFQPQVFTNLIQYVVLHSVKHLKIIVPYN-LGLPNCVYSCQXXXXXXXXXXXXXSKRRT 147
           G  +P + + L++Y   H+V+ L I V  + +  P   + C              +  + 
Sbjct: 161 GCVEPPILSKLVEYAASHNVQRLDIFVRCDGVYFPPYFFKCNTLTSLNLSSSPIPNTAKK 220

Query: 146 RIPKCMDLPALRSLHLEWVGISADNIGHAEPFSACKKLNTLYLDDC 9
             P  M LPAL SL L+W     +N G  EPFS  K+LNTL L++C
Sbjct: 221 PFPSLMTLPALTSLSLQWFAFHGNNSGRVEPFSRFKRLNTLILENC 266


>gb|AFK38351.1| unknown [Medicago truncatula]
          Length = 430

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 YFQPQVFTNLIQYVVLHSVKHLKIIVPYNLGL-PNCVYSCQXXXXXXXXXXXXXSKRRTR 144
           Y +P +F  +I+Y + H+V+HL +  P  + L P+C +SC                +   
Sbjct: 161 YLEPSLFQMIIKYAISHNVQHLLMNFPCRIDLFPSCFFSCHTLTSLNLSGYDILFGQIPI 220

Query: 143 IPKCMDLPALRSLHLEWVGISADNIG-HAEPFSACKKLNTLYLDDCFL 3
            PK ++LPAL SL L++  +   + G   EPFS    LN L +D C +
Sbjct: 221 FPKNLNLPALTSLSLKYFSLHRSDAGCVVEPFSTFNMLNRLIIDSCIV 268


>ref|XP_003621679.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355496694|gb|AES77897.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 379

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 1/106 (0%)
 Frame = -1

Query: 323 GYFQPQVFTNLIQYVVLHSVKHLKIIVPYNLG-LPNCVYSCQXXXXXXXXXXXXXSKRRT 147
           G   P++   +I+Y V H V+ L I +  ++   P C++SC                  T
Sbjct: 102 GTMYPRLLQRMIKYAVSHHVQELSINLSSDIQHFPTCLFSCHTLTSLKLVINHPTLYAGT 161

Query: 146 RIPKCMDLPALRSLHLEWVGISADNIGHAEPFSACKKLNTLYLDDC 9
             P  ++LPAL +L LE      D+ GH EPFSA   LN+L +  C
Sbjct: 162 LFPSSLNLPALATLFLESFTFPVDDDGHTEPFSAFSSLNSLIIRGC 207


>ref|XP_003597759.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355486807|gb|AES68010.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 466

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = -1

Query: 320 YFQPQVFTNLIQYVVLHSVKHLKIIVPYNLGL-PNCVYSCQXXXXXXXXXXXXXSKRRTR 144
           Y +P +F  +I+Y + H+V+HL +  P  + L P+C +SC                +   
Sbjct: 161 YLEPSLFQMIIKYAISHNVQHLLMNFPCRIDLFPSCFFSCHTLTSLNLSGYDILFGQIPI 220

Query: 143 IPKCMDLPALRSLHLEWVGISADNIG-HAEPFSACKKLNTLYLDDCFL 3
            PK ++LPAL SL L++      + G   EPFS    LN L +D C +
Sbjct: 221 FPKNLNLPALTSLSLKYFSFHRSDAGCVVEPFSTFNMLNRLIIDSCIV 268


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