BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031245
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...   200   9e-50
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...   199   2e-49
ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   165   4e-39
ref|NP_196831.1| pentatricopeptide repeat-containing protein [Ar...   154   9e-36

>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  200 bits (509), Expect = 9e-50
 Identities = 99/116 (85%), Positives = 107/116 (92%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           IRIGF A++SIET ISNMYVKCGWLDGAEVATNKMTRKN VACTGLMVGYT+AAR+RDAL
Sbjct: 219 IRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNAVACTGLMVGYTKAARNRDAL 278

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVSVGTPL 3
            LF KMISEGVELD FVFSI+LKACAAL DL+TG+QIH Y +KLGLESEVSVGTPL
Sbjct: 279 LLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPL 334



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/111 (33%), Positives = 66/111 (59%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           I++G  ++VS+ T + + YVKC   + A  A   +   N  + + L+ GY Q+ +   AL
Sbjct: 320 IKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRAL 379

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVS 18
            +F  + S+GV L+ F+++ + +AC+A+ DL  G QIH  ++K GL + +S
Sbjct: 380 EVFKAIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLS 430


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/116 (85%), Positives = 107/116 (92%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           IRI F AD+SIET ISNMYVKCGWLDGAEVATNKMTRK+ VACTGLMVGYTQAAR+RDAL
Sbjct: 207 IRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSAVACTGLMVGYTQAARNRDAL 266

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVSVGTPL 3
            LF+KMISEGVELD FVFSI+LKACAAL DL+TG+QIH Y +KLGLESEVSVGTPL
Sbjct: 267 LLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGTPL 322



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 37/111 (33%), Positives = 66/111 (59%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           I++G  ++VS+ T + + YVKC   + A  A   +   N  + + L+ GY Q+ +   AL
Sbjct: 308 IKLGLESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRAL 367

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVS 18
            +F  + S+GV L+ F+++ + +AC+A+ DL  G QIH  ++K GL + +S
Sbjct: 368 EVFKTIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLS 418


>ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|222846600|gb|EEE84147.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score =  172 bits (435), Expect = 3e-41
 Identities = 84/116 (72%), Positives = 99/116 (85%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           IR G  ++ S+ T+ISNMYVKCGWL+GAE+   KM+ KN VA TG+MVGYTQA R  DAL
Sbjct: 138 IRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDAL 197

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVSVGTPL 3
           +LFAKM++EGVELDE+VFSIVLKACA LE+L+ GRQIHG+ VKLGLESEVSVGTPL
Sbjct: 198 ALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPL 253



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/106 (30%), Positives = 61/106 (57%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           +++G  ++VS+ T + + YVKC  L+ A  A   ++  N V+ + L+ GY Q     +AL
Sbjct: 239 VKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEAL 298

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGL 33
             F  + +  V+++ F ++ + +AC+AL D ++G Q H  ++K  L
Sbjct: 299 KTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSL 344


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/116 (71%), Positives = 94/116 (81%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           IR G  A VSI T+ISNMYV+CGWLDGAE+  N M  KN VA TGLMVGYTQA + ++AL
Sbjct: 218 IRSGLGAGVSINTAISNMYVRCGWLDGAELFINNMAEKNAVAWTGLMVGYTQAGKQKNAL 277

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVSVGTPL 3
            LFAKM+ E VELDE+VFSI LKACA L++L  GRQIHG+ VKLGLESEVSVGTPL
Sbjct: 278 DLFAKMVCEDVELDEYVFSISLKACAGLKELSFGRQIHGHIVKLGLESEVSVGTPL 333



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/106 (28%), Positives = 58/106 (54%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           +++G  ++VS+ T + + Y+KC   + A      ++  N V+ + ++ GY Q     +AL
Sbjct: 319 VKLGLESEVSVGTPLVDFYIKCASFELASKVFEGISEPNDVSWSAMITGYCQIGEFEEAL 378

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGL 33
            +F  + S    L+ F ++ + +AC+AL D  TG Q+H  ++K  L
Sbjct: 379 KIFESLRSNIENLNSFTYTSIFQACSALADFSTGTQVHADAIKRSL 424



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/108 (29%), Positives = 58/108 (53%)
 Frame = -2

Query: 326 VSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDALSLFAKMIS 147
           V +E ++  MY  C  L+ A    +KM  +N+++   ++  Y +      ALSLF  MIS
Sbjct: 125 VFLENTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAEHGLLDKALSLFISMIS 184

Query: 146 EGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVSVGTPL 3
            G+  +  ++  +L++      L  G+QIH +S++ GL + VS+ T +
Sbjct: 185 LGINPNSSIYIDLLRSLLNPSLLGIGKQIHSHSIRSGLGAGVSINTAI 232


>ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
           gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
           thaliana] gi|332004490|gb|AED91873.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  154 bits (388), Expect = 9e-36
 Identities = 77/116 (66%), Positives = 90/116 (77%)
 Frame = -2

Query: 350 IRIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDAL 171
           IR G  ++ SIET I NMYVKCGWL GA+   ++M  K  VACTGLMVGYTQA R RDAL
Sbjct: 211 IRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDAL 270

Query: 170 SLFAKMISEGVELDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGLESEVSVGTPL 3
            LF  +++EGVE D FVFS+VLKACA+LE+L+ G+QIH    KLGLESEVSVGTPL
Sbjct: 271 KLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPL 326



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/106 (26%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
 Frame = -2

Query: 347 RIGFTADVSIETSISNMYVKCGWLDGAEVATNKMTRKNVVACTGLMVGYTQAARHRDALS 168
           ++G  ++VS+ T + + Y+KC   + A  A  ++   N V+ + ++ GY Q ++  +A+ 
Sbjct: 313 KLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVK 372

Query: 167 LFAKMISEGVE-LDEFVFSIVLKACAALEDLHTGRQIHGYSVKLGL 33
            F  + S+    L+ F ++ + +AC+ L D + G Q+H  ++K  L
Sbjct: 373 TFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSL 418