BLASTX nr result

ID: Glycyrrhiza23_contig00031207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031207
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptas...   119   3e-25
ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...   119   3e-25
ref|XP_003628458.1| Alpha-1 6-xylosyltransferase [Medicago trunc...   116   2e-24
emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulga...   114   8e-24
gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]          113   2e-23

>gb|ABN08564.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
            truncatula]
          Length = 977

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/158 (39%), Positives = 92/158 (58%), Gaps = 13/158 (8%)
 Frame = -2

Query: 452  WSVVCQPKKEGGLGVKDLDLFNLSLLGKWKWRFMTEPNAIWRNLLSHRYGKIDN--LFHS 279
            WS+VCQP+ +GGLGV D+ + NLSLL KW+WR + +  A+W+++L  +YG   N  L H+
Sbjct: 741  WSMVCQPRAKGGLGVGDMRVVNLSLLAKWRWRLLQKDQALWKDVLESKYGYRINFVLSHT 800

Query: 278  TRGNQNMQSFWWRDIQRLDSAHPSLHGWFTSAVRRKVLNGKSTLFWHDTWLSDVPLKILF 99
                    S WW D+  L+ A  S   WF S ++RKV +G++T FW D W+ +  L + +
Sbjct: 801  DNLWPVCTSRWWLDVVSLEEAVGS--NWFNSEMKRKVGSGENTRFWLDHWVGEALLCLTY 858

Query: 98   PRLFSISSVQDCMVADFGL-----------WRGDLWCW 18
            PR FSISS  + MV D  +           WR +L+ W
Sbjct: 859  PRHFSISSQIEGMVGDVWVEYEGGGVWEFYWRRNLFMW 896


>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score =  119 bits (297), Expect = 3e-25
 Identities = 60/150 (40%), Positives = 83/150 (55%), Gaps = 5/150 (3%)
 Frame = -2

Query: 452  WSVVCQPKKEGGLGVKDLDLFNLSLLGKWKWRFMTEPNAIWRNLLSHRYGKIDNLFHSTR 273
            W  +C PK++GGLGV+ L  FN SLLGKW WR + +   +W  +L  RYG+        R
Sbjct: 1381 WDDICVPKEDGGLGVRRLREFNFSLLGKWCWRMLVDKEGLWYCVLKARYGEEGGRL-MER 1439

Query: 272  GNQNMQSFWWRDIQRL-DSAHPSLHGWFTSAVRRKVLNGKSTLFWHDTWLSDVPLKILFP 96
            G  +  S WWR +  +       +  WF   +RR+V NG  TLFWHD W+ + PL+  +P
Sbjct: 1440 GRHS--SVWWRMLCNVRGGVGEGVGNWFDGNIRREVGNGLGTLFWHDHWVGESPLRYKYP 1497

Query: 95   RLFSISSVQDCMVADFGL--W--RGDLWCW 18
            RLF ++  +DC VAD     W   G +W W
Sbjct: 1498 RLFDLAVNKDCTVADMERDGWEDEGGVWVW 1527


>ref|XP_003628458.1| Alpha-1 6-xylosyltransferase [Medicago truncatula]
           gi|355522480|gb|AET02934.1| Alpha-1 6-xylosyltransferase
           [Medicago truncatula]
          Length = 763

 Score =  116 bits (291), Expect = 2e-24
 Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
 Frame = -2

Query: 443 VCQPKKEGGLGVKDLDLFNLSLLGKWKWRFMTEPNAIWRNLLSHRYGKIDNLFHSTRGNQ 264
           +C PK++GGLGV+ +  FNLSLLGKW WR + +   +W  +L  RYG+         G  
Sbjct: 463 ICTPKEDGGLGVRRVSAFNLSLLGKWCWRMLIDREGMWYRVLKARYGEEGGRLREG-GRH 521

Query: 263 NMQSFWWRDIQRL-DSAHPSLHGWFTSAVRRKVLNGKSTLFWHDTWLSDVPLKILFPRLF 87
           ++   WWR + R+ +     +  WF S + R V +GK+ LF HD W  ++PLK+ FPRLF
Sbjct: 522 SLA--WWRSLCRVREGIGEGVGSWFDSNIPRVVGDGKNILFLHDIWTGEIPLKVKFPRLF 579

Query: 86  SISSVQDCMVADFGLWRGDLWCWNCSWR 3
            +S +Q+C V +     G+   W   WR
Sbjct: 580 ELSVIQECSVEEMLRVMGEDDGWERLWR 607


>emb|CCA66180.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1383

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/155 (37%), Positives = 84/155 (54%), Gaps = 5/155 (3%)
 Frame = -2

Query: 452  WSVVCQPKKEGGLGVKDLDLFNLSLLGKWKWRFMTEPNAIWRNLLSHRYG-----KIDNL 288
            WS+V QPK  GGLG+ ++   NLSLL KW WR    P+++W +++  +Y       I +L
Sbjct: 838  WSIVQQPKTSGGLGIGNILHKNLSLLFKWIWRLFENPSSMWGSIIRSKYNYSSTCSISDL 897

Query: 287  FHSTRGNQNMQSFWWRDIQRLDSAHPSLHGWFTSAVRRKVLNGKSTLFWHDTWLSDVPLK 108
                 G        W+ I      H        + +R+ V NG S+LFWHDTWL + PLK
Sbjct: 898  KKPVSGGP------WKSICAAVLGHEGARLIAVNGMRKNVGNGISSLFWHDTWLCEQPLK 951

Query: 107  ILFPRLFSISSVQDCMVADFGLWRGDLWCWNCSWR 3
             + PRLFSI+  ++  +A +G+W G  W W  SW+
Sbjct: 952  RIAPRLFSIAINKNSSIASYGVWEGFNWVWVFSWK 986


>gb|AER13156.1| putative retrotransposon [Phaseolus vulgaris]
          Length = 1759

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/151 (37%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
 Frame = -2

Query: 452  WSVVCQPKKEGGLGVKDLDLFNLSLLGKWKWRFMTEPNAIWRNLLSHRYGKIDNL-FHST 276
            W  VC+PK+EGGLG +++ LFN +LL KW+WR ++E    W+ LL  +Y    NL   S+
Sbjct: 1307 WKDVCRPKEEGGLGCRNIRLFNQALLAKWRWRCVSEEKGRWKTLLESKY----NLGIDSS 1362

Query: 275  RGNQNMQSFWWRDIQRLDSAHPSLHGWFTSAVRRKVLNGKSTLFWHDTWLSDVPLKILFP 96
            +     QS+WWRD+ ++        GWF   +  ++  G    F  + W+  V LK LFP
Sbjct: 1363 QTPVKSQSWWWRDLSKM-CKEGGGKGWFQEELGWEIGYGDKVKFSEEVWVGSVDLKSLFP 1421

Query: 95   RLFSISSVQDCMVADFGLWRGDLWCWNCSWR 3
            RL+S+S  Q   V + G W    W W   W+
Sbjct: 1422 RLYSLSLNQGQTVGELGEWIDSEWRWRMRWK 1452


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