BLASTX nr result

ID: Glycyrrhiza23_contig00031164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031164
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532225.1| PREDICTED: nucleolar GTP-binding protein 1-l...   132   2e-29
ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-l...    94   9e-18
emb|CBI39064.3| unnamed protein product [Vitis vinifera]               94   9e-18
ref|XP_004164807.1| PREDICTED: nucleolar GTP-binding protein 1-l...    89   4e-16
ref|XP_004133958.1| PREDICTED: nucleolar GTP-binding protein 1-l...    89   4e-16

>ref|XP_003532225.1| PREDICTED: nucleolar GTP-binding protein 1-like [Glycine max]
          Length = 435

 Score =  132 bits (333), Expect = 2e-29
 Identities = 78/116 (67%), Positives = 87/116 (75%), Gaps = 4/116 (3%)
 Frame = +2

Query: 38  MKGSSTLFLKGH-FPSSILLL---KGTPNAAKLRRPNSCLCCKSIQTNSYEVVTNGSYVP 205
           MK  S+LFLKGH  PSSI LL   KGTPN      P  CLC K+IQTNSYE+ +NGSY P
Sbjct: 1   MKAPSSLFLKGHVLPSSIFLLRNSKGTPNVKM--HPIWCLC-KAIQTNSYEI-SNGSYHP 56

Query: 206 TLHQTKENNITEKPSRKTESIGAFQKLPIVMPSIDILG*ALRKAKRISPTKGIAEI 373
           T+ QT E    EK SRK ESIGAFQKLPIVMPSIDI+G ALRKA+++SPTKGIA I
Sbjct: 57  TVQQTTEKKTMEKLSRKVESIGAFQKLPIVMPSIDIIGSALRKARKVSPTKGIANI 112


>ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-like [Vitis vinifera]
          Length = 445

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = +2

Query: 38  MKGSSTLFLKGHFPSSILLL------KGTPNAAKLRRPNSCLCCKSIQTNSYEVVTNGSY 199
           M G+S L    H PS+ LLL      KG+          + + CK IQT +Y +V NGSY
Sbjct: 1   MSGTSHLIQLWHIPSTKLLLRSSNFSKGSYLVPAAEIYPTKIFCKKIQTTAYRIV-NGSY 59

Query: 200 VPTLHQTKENNITEKPSRKTESIGAFQKLPIVMPSIDILG*ALRKAKRISPTKGIAEI 373
           VP      ++N  +  S   E++GAFQKLP+VMPS+DIL  ALRKAKR+SPTKGIA I
Sbjct: 60  VPVPQNKNQSNKEDIASTTLETVGAFQKLPMVMPSVDILYSALRKAKRVSPTKGIANI 117


>emb|CBI39064.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 57/118 (48%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
 Frame = +2

Query: 38  MKGSSTLFLKGHFPSSILLL------KGTPNAAKLRRPNSCLCCKSIQTNSYEVVTNGSY 199
           M G+S L    H PS+ LLL      KG+          + + CK IQT +Y +V NGSY
Sbjct: 1   MSGTSHLIQLWHIPSTKLLLRSSNFSKGSYLVPAAEIYPTKIFCKKIQTTAYRIV-NGSY 59

Query: 200 VPTLHQTKENNITEKPSRKTESIGAFQKLPIVMPSIDILG*ALRKAKRISPTKGIAEI 373
           VP      ++N  +  S   E++GAFQKLP+VMPS+DIL  ALRKAKR+SPTKGIA I
Sbjct: 60  VPVPQNKNQSNKEDIASTTLETVGAFQKLPMVMPSVDILYSALRKAKRVSPTKGIANI 117


>ref|XP_004164807.1| PREDICTED: nucleolar GTP-binding protein 1-like [Cucumis sativus]
          Length = 444

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
 Frame = +2

Query: 131 PNSCLCCKSIQTNSYEVVTNGSYVPTLHQTKENNITEK---PSRKTESIGAFQKLPIVMP 301
           PN C C +SIQT +Y VV  GSY+P   +TK+ N  +K   PS+  E++GAFQKLP+VMP
Sbjct: 41  PNQCFC-RSIQTETYNVV-RGSYIPKT-ETKDQNEAKKKDEPSKSLENMGAFQKLPMVMP 97

Query: 302 SIDILG*ALRKAKRISPTKGIAEI 373
           SIDIL  AL+ AKR+SPTKGIA I
Sbjct: 98  SIDILHSALKTAKRVSPTKGIANI 121


>ref|XP_004133958.1| PREDICTED: nucleolar GTP-binding protein 1-like [Cucumis sativus]
          Length = 444

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 3/84 (3%)
 Frame = +2

Query: 131 PNSCLCCKSIQTNSYEVVTNGSYVPTLHQTKENNITEK---PSRKTESIGAFQKLPIVMP 301
           PN C C +SIQT +Y VV  GSY+P   +TK+ N  +K   PS+  E++GAFQKLP+VMP
Sbjct: 41  PNQCFC-RSIQTETYNVV-RGSYIPKT-ETKDQNEAKKKDEPSKSLENMGAFQKLPMVMP 97

Query: 302 SIDILG*ALRKAKRISPTKGIAEI 373
           SIDIL  AL+ AKR+SPTKGIA I
Sbjct: 98  SIDILHSALKTAKRVSPTKGIANI 121


Top