BLASTX nr result
ID: Glycyrrhiza23_contig00031143
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00031143
(637 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containi... 258 2e-97
ref|XP_003631084.1| Pentatricopeptide repeat-containing protein ... 246 4e-94
gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula] 246 4e-94
ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containi... 246 2e-92
ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containi... 237 7e-89
>ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Glycine max]
Length = 763
Score = 258 bits (660), Expect(2) = 2e-97
Identities = 124/138 (89%), Positives = 128/138 (92%)
Frame = +2
Query: 206 RKYLGIVG*EVQNKIHTFTVGDCFHSEKDRIYAFLEELDLKMRREGYVPSTKLVLHDVEE 385
+K G EVQNKIHTF+VGDCFH EKDRIYAFLEELDLKMRREGYV STKLVLHDVEE
Sbjct: 626 QKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMRREGYVSSTKLVLHDVEE 685
Query: 386 EEKERMLKYHSEKLAVAFGILTIPSGRPIRVMKNLRVCHDCHNAIKHISKIVGRLIILRD 565
EEKE MLKYHSEKLAVAFGILTIP+GRPIRVMKNLRVC DCHNAIKHISKIVGRLIILRD
Sbjct: 686 EEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHNAIKHISKIVGRLIILRD 745
Query: 566 SHRFHHFNEGICSCGDYW 619
SHRFHHF+EGICSCGDYW
Sbjct: 746 SHRFHHFSEGICSCGDYW 763
Score = 123 bits (308), Expect(2) = 2e-97
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +1
Query: 40 RIHGNTELGEKAAEMVFKMEPHNSGMYILLSNLYAASGRWVDVGKMRSRMRDVGVQKVPG 219
RIHGNTELGEKAAEMVFKMEP NSGMY+LLSNLYAASGRWVDVGKMRS+MR+ GVQKV G
Sbjct: 571 RIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDVGKMRSKMREAGVQKVTG 630
Query: 220 YSWM 231
YSW+
Sbjct: 631 YSWV 634
>ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 980
Score = 246 bits (628), Expect(2) = 4e-94
Identities = 116/129 (89%), Positives = 120/129 (93%)
Frame = +2
Query: 233 EVQNKIHTFTVGDCFHSEKDRIYAFLEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKY 412
EVQNKIHTF+VGDC H EK+RIYA+LEELDLKMR EGYV TKLVLHDVEEEEKE MLKY
Sbjct: 638 EVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKY 697
Query: 413 HSEKLAVAFGILTIPSGRPIRVMKNLRVCHDCHNAIKHISKIVGRLIILRDSHRFHHFNE 592
HSEKLAVAFGILTIP GRPIRVMKNLRVC DCH+AIKHISKIVGRLIILRDSHRFHHFNE
Sbjct: 698 HSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNE 757
Query: 593 GICSCGDYW 619
G CSCGDYW
Sbjct: 758 GFCSCGDYW 766
Score = 124 bits (312), Expect(2) = 4e-94
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +1
Query: 40 RIHGNTELGEKAAEMVFKMEPHNSGMYILLSNLYAASGRWVDVGKMRSRMRDVGVQKVPG 219
RIHGNTELGEKAAEMVFKMEP NSGMY+LLSNLYAASGRWVD KMRS+MRD+GVQKVPG
Sbjct: 574 RIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPG 633
Query: 220 YSWM 231
YSW+
Sbjct: 634 YSWV 637
Score = 143 bits (361), Expect = 2e-32
Identities = 82/130 (63%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Frame = +2
Query: 233 EVQNKIHTFTVGDCFHSEKDRIYAFLEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKY 412
EVQNKIHTF+VG E++ I FLEELDLKMR EEEKER LKY
Sbjct: 869 EVQNKIHTFSVGLFLSRERENI-GFLEELDLKMRER--------------EEEKERTLKY 913
Query: 413 HSEKLAVAFGILTIPSGRPIRVMKN-LRVCHDCHNAIKHISKIVGRLIILRDSHRFHHFN 589
SE LA A GILTIP GRP RVMK + VC DC +AIKH+SKIVGRLI LRDSHR FN
Sbjct: 914 LSENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLITLRDSHR---FN 970
Query: 590 EGICSCGDYW 619
E ICSCG+YW
Sbjct: 971 ESICSCGEYW 980
Score = 71.2 bits (173), Expect = 1e-10
Identities = 43/87 (49%), Positives = 49/87 (56%)
Frame = +1
Query: 40 RIHGNTELGEKAAEMVFKMEPHNSGMYILLSNLYAASGRWVDVGKMRSRMRDVGVQKVPG 219
RIHGNTELGEKAA+M FKM P NSG+ S+MRDVGVQKVPG
Sbjct: 826 RIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDVGVQKVPG 864
Query: 220 YSWMRGTKQDSYVHSWGLFPFRKG*NI 300
YSW + + S GLF R+ NI
Sbjct: 865 YSWFE-VQNKIHTFSVGLFLSRERENI 890
>gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 246 bits (628), Expect(2) = 4e-94
Identities = 116/129 (89%), Positives = 120/129 (93%)
Frame = +2
Query: 233 EVQNKIHTFTVGDCFHSEKDRIYAFLEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKY 412
EVQNKIHTF+VGDC H EK+RIYA+LEELDLKMR EGYV TKLVLHDVEEEEKE MLKY
Sbjct: 638 EVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMREEGYVSLTKLVLHDVEEEEKEHMLKY 697
Query: 413 HSEKLAVAFGILTIPSGRPIRVMKNLRVCHDCHNAIKHISKIVGRLIILRDSHRFHHFNE 592
HSEKLAVAFGILTIP GRPIRVMKNLRVC DCH+AIKHISKIVGRLIILRDSHRFHHFNE
Sbjct: 698 HSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHSAIKHISKIVGRLIILRDSHRFHHFNE 757
Query: 593 GICSCGDYW 619
G CSCGDYW
Sbjct: 758 GFCSCGDYW 766
Score = 124 bits (312), Expect(2) = 4e-94
Identities = 57/64 (89%), Positives = 61/64 (95%)
Frame = +1
Query: 40 RIHGNTELGEKAAEMVFKMEPHNSGMYILLSNLYAASGRWVDVGKMRSRMRDVGVQKVPG 219
RIHGNTELGEKAAEMVFKMEP NSGMY+LLSNLYAASGRWVD KMRS+MRD+GVQKVPG
Sbjct: 574 RIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPG 633
Query: 220 YSWM 231
YSW+
Sbjct: 634 YSWV 637
>ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Glycine max]
Length = 750
Score = 246 bits (627), Expect(2) = 2e-92
Identities = 115/129 (89%), Positives = 122/129 (94%)
Frame = +2
Query: 233 EVQNKIHTFTVGDCFHSEKDRIYAFLEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKY 412
EVQNKIHTFTVGDCFH EK RIYAFLEELDLKM+ EGYV STKLVLHDVEEEEK+ MLKY
Sbjct: 622 EVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKMKHEGYVSSTKLVLHDVEEEEKKHMLKY 681
Query: 413 HSEKLAVAFGILTIPSGRPIRVMKNLRVCHDCHNAIKHISKIVGRLIILRDSHRFHHFNE 592
HSEKLAVAFGILT+PSG+PIRVMKNLRVC DCHNAIKHISKIVGRLII+RDSHR+HHF+E
Sbjct: 682 HSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCHNAIKHISKIVGRLIIVRDSHRYHHFSE 741
Query: 593 GICSCGDYW 619
GICSC DYW
Sbjct: 742 GICSCRDYW 750
Score = 119 bits (299), Expect(2) = 2e-92
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = +1
Query: 40 RIHGNTELGEKAAEMVFKMEPHNSGMYILLSNLYAASGRWVDVGKMRSRMRDVGVQKVPG 219
RIHGN ELGE+AAEMVFKMEPHNSGMY+LLSNLYAASGRWVDV KMR +MR +GVQK PG
Sbjct: 558 RIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAASGRWVDVSKMRLKMRQIGVQKTPG 617
Query: 220 YSWM 231
YSW+
Sbjct: 618 YSWV 621
>ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
[Vitis vinifera]
Length = 766
Score = 237 bits (605), Expect(2) = 7e-89
Identities = 112/129 (86%), Positives = 118/129 (91%)
Frame = +2
Query: 233 EVQNKIHTFTVGDCFHSEKDRIYAFLEELDLKMRREGYVPSTKLVLHDVEEEEKERMLKY 412
EVQNKIHTFTVGD H E+DRIY FLEELDLKM++EGYV STKLVLHDVEEEEK MLKY
Sbjct: 638 EVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKY 697
Query: 413 HSEKLAVAFGILTIPSGRPIRVMKNLRVCHDCHNAIKHISKIVGRLIILRDSHRFHHFNE 592
HSEKLAVAFGIL IP+GRPIRV+KNLRVC DCHNA+KHISKIVGRLIILRDSHRFHHFN
Sbjct: 698 HSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNG 757
Query: 593 GICSCGDYW 619
G CSCGDYW
Sbjct: 758 GQCSCGDYW 766
Score = 116 bits (290), Expect(2) = 7e-89
Identities = 53/64 (82%), Positives = 60/64 (93%)
Frame = +1
Query: 40 RIHGNTELGEKAAEMVFKMEPHNSGMYILLSNLYAASGRWVDVGKMRSRMRDVGVQKVPG 219
RIHGNTELGEKAA+M+F+MEP NSGMY+LLSNLYAASGRW DVG+MR RMRD GV+KVPG
Sbjct: 574 RIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPG 633
Query: 220 YSWM 231
YSW+
Sbjct: 634 YSWV 637