BLASTX nr result

ID: Glycyrrhiza23_contig00031125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031125
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [...   157   1e-36
ref|XP_003602622.1| Germin-like protein [Medicago truncatula] gi...   153   1e-35
emb|CBI37530.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis...   141   6e-32
emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]   141   6e-32

>ref|XP_003526865.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 477

 Score =  157 bits (396), Expect = 1e-36
 Identities = 85/129 (65%), Positives = 93/129 (72%), Gaps = 1/129 (0%)
 Frame = -2

Query: 388 VLGSFFRPSWAXXXXXXXXXXXXXLQLSTTWTTVFPVWVLSG-STGPQPFTDPTTCSGFF 212
           VLG+  RPSWA             L L        PVW LSG   GP P T PT C+GFF
Sbjct: 12  VLGTCTRPSWALIFLLFTLVTFLTLHLPAR-----PVWFLSGLQPGPYPTTTPT-CAGFF 65

Query: 211 RDVQPRKVVRSIEDFGGVGDGKTSNTEAFRRAIGYMQRFRDKGGSQLNIPRGTWLTGSFN 32
           RDV PRKVV SIEDFGGVGDGKTSNTE+FRRAI YMQRF+++GG+QLNIP GTWLTGSFN
Sbjct: 66  RDVPPRKVVLSIEDFGGVGDGKTSNTESFRRAIRYMQRFQNRGGAQLNIPTGTWLTGSFN 125

Query: 31  LTSDFTLFL 5
           LTS+FTLFL
Sbjct: 126 LTSNFTLFL 134


>ref|XP_003602622.1| Germin-like protein [Medicago truncatula]
           gi|355491670|gb|AES72873.1| Germin-like protein
           [Medicago truncatula]
          Length = 775

 Score =  153 bits (387), Expect = 1e-35
 Identities = 81/129 (62%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
 Frame = -2

Query: 388 VLGSFFRPSWAXXXXXXXXXXXXXLQLSTTWTTVFPVWVLSGSTGPQP-FTDPTTCSGFF 212
           +LGS+ +PS +             LQ ST   ++FP+ +L  S  PQP   DPTTCSGFF
Sbjct: 10  ILGSYTKPSCSILFLFFTFLTILSLQFSTR--SLFPLSILL-SQQPQPSLVDPTTCSGFF 66

Query: 211 RDVQPRKVVRSIEDFGGVGDGKTSNTEAFRRAIGYMQRFRDKGGSQLNIPRGTWLTGSFN 32
            +V PRK+++SI DFGGVGDGKTSNT++F+RAI YMQRFR KGGSQLNIP GTWLTGSFN
Sbjct: 67  NNVPPRKIIKSIVDFGGVGDGKTSNTQSFQRAIRYMQRFRGKGGSQLNIPNGTWLTGSFN 126

Query: 31  LTSDFTLFL 5
           LTSDFTLFL
Sbjct: 127 LTSDFTLFL 135


>emb|CBI37530.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/128 (57%), Positives = 84/128 (65%)
 Frame = -2

Query: 385 LGSFFRPSWAXXXXXXXXXXXXXLQLSTTWTTVFPVWVLSGSTGPQPFTDPTTCSGFFRD 206
           +G F RPSWA              Q+ T   TVFP WV+ G        +  +C G FR+
Sbjct: 12  MGGFTRPSWAFLLLVFIVLVVSCFQIGTK--TVFPRWVVLGGGETGISEEAPSCFGLFRE 69

Query: 205 VQPRKVVRSIEDFGGVGDGKTSNTEAFRRAIGYMQRFRDKGGSQLNIPRGTWLTGSFNLT 26
           V PRKVV SI DFGGVGDG TSNTE FRRAI YMQ F + GGSQLN+PRG W+TGSFNLT
Sbjct: 70  VPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLT 129

Query: 25  SDFTLFLQ 2
           S+FTLFL+
Sbjct: 130 SNFTLFLE 137


>ref|XP_002274138.1| PREDICTED: probable polygalacturonase [Vitis vinifera]
          Length = 488

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/128 (57%), Positives = 84/128 (65%)
 Frame = -2

Query: 385 LGSFFRPSWAXXXXXXXXXXXXXLQLSTTWTTVFPVWVLSGSTGPQPFTDPTTCSGFFRD 206
           +G F RPSWA              Q+ T   TVFP WV+ G        +  +C G FR+
Sbjct: 12  MGGFTRPSWAFLLLVFIVLVVSCFQIGTK--TVFPRWVVLGGGETGISEEAPSCFGLFRE 69

Query: 205 VQPRKVVRSIEDFGGVGDGKTSNTEAFRRAIGYMQRFRDKGGSQLNIPRGTWLTGSFNLT 26
           V PRKVV SI DFGGVGDG TSNTE FRRAI YMQ F + GGSQLN+PRG W+TGSFNLT
Sbjct: 70  VPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLT 129

Query: 25  SDFTLFLQ 2
           S+FTLFL+
Sbjct: 130 SNFTLFLE 137


>emb|CAN76963.1| hypothetical protein VITISV_043959 [Vitis vinifera]
          Length = 479

 Score =  141 bits (355), Expect = 6e-32
 Identities = 73/128 (57%), Positives = 84/128 (65%)
 Frame = -2

Query: 385 LGSFFRPSWAXXXXXXXXXXXXXLQLSTTWTTVFPVWVLSGSTGPQPFTDPTTCSGFFRD 206
           +G F RPSWA              Q+ T   TVFP WV+ G        +  +C G FR+
Sbjct: 1   MGGFTRPSWAFLLLVFIVLVVSCFQIGTK--TVFPRWVVLGGGETGISEEAPSCFGLFRE 58

Query: 205 VQPRKVVRSIEDFGGVGDGKTSNTEAFRRAIGYMQRFRDKGGSQLNIPRGTWLTGSFNLT 26
           V PRKVV SI DFGGVGDG TSNTE FRRAI YMQ F + GGSQLN+PRG W+TGSFNLT
Sbjct: 59  VPPRKVVMSIRDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLT 118

Query: 25  SDFTLFLQ 2
           S+FTLFL+
Sbjct: 119 SNFTLFLE 126


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