BLASTX nr result

ID: Glycyrrhiza23_contig00031115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031115
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530283.1| PREDICTED: uncharacterized protein LOC100775...   258   4e-67
ref|XP_003548745.1| PREDICTED: uncharacterized protein LOC100796...   256   2e-66
ref|NP_198053.1| armadillo/beta-catenin-like repeat-containing p...   158   4e-37
ref|XP_002298187.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_002871213.1| binding protein [Arabidopsis lyrata subsp. l...   144   6e-33

>ref|XP_003530283.1| PREDICTED: uncharacterized protein LOC100775525 [Glycine max]
          Length = 888

 Score =  258 bits (659), Expect = 4e-67
 Identities = 136/173 (78%), Positives = 144/173 (83%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3    TLVSRFKVSPEVGSAGLKSDALCQTLKKMTAVLCSYMAQMGDNSLVLQLIEKVIIDQILG 182
            TLV RFKVSPE+GSAG KSD LCQTLK MT VLCSYMAQMGDNSLVLQ++EKVIIDQI  
Sbjct: 648  TLVLRFKVSPEIGSAGFKSDPLCQTLKSMTTVLCSYMAQMGDNSLVLQIVEKVIIDQIPQ 707

Query: 183  KPSLDNSCCLLRMLATVDSKPTRLSEQSIITLGPCLSEYLMDAVQCIPEDDDERQIPS-- 356
            KPSLDNSC LLRML TVDSKPTRLSEQSII LG  LSEYLMDAVQCIPED DE+  PS  
Sbjct: 708  KPSLDNSCSLLRMLVTVDSKPTRLSEQSIIILGQHLSEYLMDAVQCIPEDGDEQGTPSIQ 767

Query: 357  -NRPHYYLLPCFSLFDQCRELTSNVLKTMGSAITESSLYPISDDGTQHTRNYL 512
             +  HYYLLPCF LFD+C +L + VLK MGSAITESSL PISD  TQHTRN L
Sbjct: 768  LSTRHYYLLPCFFLFDRCHKLMNLVLKRMGSAITESSLSPISDKCTQHTRNCL 820


>ref|XP_003548745.1| PREDICTED: uncharacterized protein LOC100796115 [Glycine max]
          Length = 884

 Score =  256 bits (653), Expect = 2e-66
 Identities = 134/173 (77%), Positives = 143/173 (82%), Gaps = 3/173 (1%)
 Frame = +3

Query: 3    TLVSRFKVSPEVGSAGLKSDALCQTLKKMTAVLCSYMAQMGDNSLVLQLIEKVIIDQILG 182
            TLV RFKVSPE+GSAG KSD LCQTLK MT VLCSYMAQMGDNSLVLQ++EKV+IDQI  
Sbjct: 644  TLVLRFKVSPEIGSAGFKSDPLCQTLKSMTTVLCSYMAQMGDNSLVLQIVEKVVIDQIPQ 703

Query: 183  KPSLDNSCCLLRMLATVDSKPTRLSEQSIITLGPCLSEYLMDAVQCIPEDDDERQIPS-- 356
             PSLDNSC LLRML TVDSKPTRLSEQSII LG  LSEYLMDAVQCIPED DE+  PS  
Sbjct: 704  MPSLDNSCSLLRMLVTVDSKPTRLSEQSIIILGQHLSEYLMDAVQCIPEDGDEQGTPSIQ 763

Query: 357  -NRPHYYLLPCFSLFDQCRELTSNVLKTMGSAITESSLYPISDDGTQHTRNYL 512
             +  HYYLLPCF LFD+C +L + VLK MGSAITESSL PISD  TQHTRN L
Sbjct: 764  LSTQHYYLLPCFFLFDRCHKLMNLVLKRMGSAITESSLSPISDKCTQHTRNCL 816


>ref|NP_198053.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis
            thaliana] gi|332006257|gb|AED93640.1|
            armadillo/beta-catenin-like repeat-containing protein
            [Arabidopsis thaliana]
          Length = 863

 Score =  158 bits (400), Expect = 4e-37
 Identities = 79/156 (50%), Positives = 110/156 (70%), Gaps = 3/156 (1%)
 Frame = +3

Query: 3    TLVSRFKVSPEVGSAGLKSD---ALCQTLKKMTAVLCSYMAQMGDNSLVLQLIEKVIIDQ 173
            TL+SRFKV PE  ++ ++ D   A C T K +T ++CSY+++MGD+SLVLQ++EKV ++Q
Sbjct: 619  TLISRFKVVPEKLNSAIECDERKANCGTFKTLTNLVCSYLSEMGDSSLVLQILEKVFVEQ 678

Query: 174  ILGKPSLDNSCCLLRMLATVDSKPTRLSEQSIITLGPCLSEYLMDAVQCIPEDDDERQIP 353
            I+ KP+LDN C +LRM+  +DSKPTRLSE S+ TL   L  YL+D V CIPED +   + 
Sbjct: 679  IILKPALDNGCAILRMICALDSKPTRLSEISVTTLSEFLPGYLIDIVNCIPEDKERSYLY 738

Query: 354  SNRPHYYLLPCFSLFDQCRELTSNVLKTMGSAITES 461
                 YYLLPC+ LFD+  +LT  VLK M S ++E+
Sbjct: 739  MQTCLYYLLPCYFLFDRSSKLTEQVLKRMRSMVSEN 774


>ref|XP_002298187.1| predicted protein [Populus trichocarpa] gi|222845445|gb|EEE82992.1|
            predicted protein [Populus trichocarpa]
          Length = 834

 Score =  149 bits (377), Expect = 2e-34
 Identities = 84/166 (50%), Positives = 105/166 (63%), Gaps = 5/166 (3%)
 Frame = +3

Query: 3    TLVSRFKVSPEVGSAGLKSDALCQ---TLKKMTAVLCSYMAQMGDNSLVLQLIEKVIIDQ 173
            TL SRFKV PE      + D       T K + +V+CS ++QMGDNSLV  ++EKVI++Q
Sbjct: 588  TLASRFKVFPENIFPATERDKKTSNRATFKSLISVVCSCLSQMGDNSLVFAILEKVILEQ 647

Query: 174  ILGKPSLDNSCCLLRMLATVDSKPTRLSEQSIITLGPCLSEYLMDAVQCIPEDDDE--RQ 347
            I  KP LDNSC +LRML  +DSKPTRLS+QSI +L   LS YL+D   C+PEDDDE    
Sbjct: 648  ISLKPPLDNSCAMLRMLVALDSKPTRLSKQSICSLSNVLSAYLIDVAHCVPEDDDESMSS 707

Query: 348  IPSNRPHYYLLPCFSLFDQCRELTSNVLKTMGSAITESSLYPISDD 485
            I      YYLLP F LFD+  +L + VL  MGS+I   S   +S D
Sbjct: 708  IHGQTRRYYLLPSFILFDRSHKLLNLVLNVMGSSINGRSFSLLSGD 753


>ref|XP_002871213.1| binding protein [Arabidopsis lyrata subsp. lyrata]
            gi|297317050|gb|EFH47472.1| binding protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 890

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/157 (45%), Positives = 109/157 (69%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3    TLVSRFKVSPEVGSAGLKS---DALCQTLKKMTAVLCSYMAQMGDNSLVLQLIEKVIIDQ 173
            TL++RFKV PE   + ++    +  C T K++T ++CS +++MGD+SLVLQ++EKV+++Q
Sbjct: 646  TLIARFKVVPEKLQSPIECNERETYCGTFKEVTKLVCSCLSEMGDSSLVLQIVEKVLLEQ 705

Query: 174  ILGKPSLDNSCCLLRMLATVDSKPTRLSEQSIITLGPCLSEYLMDAVQCIPEDDDERQIP 353
            I+ KP+LDN C +LRM+  +DS PTRLSE+S+ TL   L  Y++D V CIPED +   + 
Sbjct: 706  IILKPALDNGCAILRMICVLDSTPTRLSERSVTTLSEFLPGYMIDIVNCIPEDKENSYLY 765

Query: 354  SNRPHYYLLPCFSLFDQCRELTSNVLKTMGSAITESS 464
                 YYL+PC+ LF++  +LT  VL  M S I+E++
Sbjct: 766  IQTCLYYLVPCYFLFNRSSKLTEQVLIRMRSMISENT 802


Top