BLASTX nr result

ID: Glycyrrhiza23_contig00031112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031112
         (494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago trunca...   226   2e-57
ref|XP_003616131.1| Regulator of nonsense transcripts-like prote...   218   5e-55
ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase...   217   9e-55
ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago trunca...   216   2e-54
ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago trunca...   214   4e-54

>ref|XP_003616121.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517456|gb|AES99079.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 978

 Score =  226 bits (575), Expect = 2e-57
 Identities = 114/148 (77%), Positives = 129/148 (87%)
 Frame = -3

Query: 492  QVYEIHEKVKQYISVSDPYFSVSVRSVDGFQGGEEDIVIISTVRSNGSGKVGFLSDRQRA 313
            QV+EI EKVKQY+ VSDP FSVSVRSVDGFQGGEEDI+IISTVRSN SGKVGFLS+RQRA
Sbjct: 769  QVHEIQEKVKQYM-VSDPNFSVSVRSVDGFQGGEEDIIIISTVRSNLSGKVGFLSNRQRA 827

Query: 312  NVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKKLAQAIEDALFEF 133
            NV+ITRARYCLWI+GNATTL+NSNS W K+V+DAKER+CFH+ DEDKKL Q IEDA FEF
Sbjct: 828  NVAITRARYCLWIVGNATTLVNSNSVWRKVVVDAKERDCFHNTDEDKKLDQVIEDACFEF 887

Query: 132  ELLYEPVSPFKKLSLRDKSDSAATSSRY 49
            ELL E  S F KLS+RD S+++  SS Y
Sbjct: 888  ELLDESASAFNKLSIRDMSETSTFSSHY 915


>ref|XP_003616131.1| Regulator of nonsense transcripts-like protein [Medicago truncatula]
            gi|355517466|gb|AES99089.1| Regulator of nonsense
            transcripts-like protein [Medicago truncatula]
          Length = 950

 Score =  218 bits (554), Expect = 5e-55
 Identities = 108/147 (73%), Positives = 126/147 (85%)
 Frame = -3

Query: 492  QVYEIHEKVKQYISVSDPYFSVSVRSVDGFQGGEEDIVIISTVRSNGSGKVGFLSDRQRA 313
            QVYEI EKVKQY SVSD  FSVSVRS+DGFQGGEEDI+IISTVRSNGSG VGFLS+RQRA
Sbjct: 775  QVYEIQEKVKQYTSVSDTDFSVSVRSIDGFQGGEEDIIIISTVRSNGSGNVGFLSNRQRA 834

Query: 312  NVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKKLAQAIEDALFEF 133
            NV++TRARYCLWILGNA+TL NS+S W KL++DAK R+C+H+AD+DKKLA+ I+D LFE 
Sbjct: 835  NVAMTRARYCLWILGNASTLANSDSIWRKLIVDAKRRDCYHNADDDKKLARVIDDVLFEI 894

Query: 132  ELLYEPVSPFKKLSLRDKSDSAATSSR 52
            ELL E  S FKKLSL +K +   +SSR
Sbjct: 895  ELLEESESKFKKLSLCEKPEIDGSSSR 921


>ref|XP_003600606.1| DNA polymerase alpha-associated DNA helicase A [Medicago truncatula]
            gi|355489654|gb|AES70857.1| DNA polymerase
            alpha-associated DNA helicase A [Medicago truncatula]
          Length = 950

 Score =  217 bits (552), Expect = 9e-55
 Identities = 109/147 (74%), Positives = 125/147 (85%)
 Frame = -3

Query: 492  QVYEIHEKVKQYISVSDPYFSVSVRSVDGFQGGEEDIVIISTVRSNGSGKVGFLSDRQRA 313
            QVYEI EK+K   S+SDP FSVSVRSVDGFQGGEEDI+IISTVRSN   K+GFLS+RQRA
Sbjct: 776  QVYEIQEKIKPNNSISDPNFSVSVRSVDGFQGGEEDIIIISTVRSNEDAKIGFLSNRQRA 835

Query: 312  NVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKKLAQAIEDALFEF 133
            NV++TRAR+CLWILGN TTL  S+S W +LVLDAKER CFH+ADEDKKLA+AIEDAL E 
Sbjct: 836  NVALTRARHCLWILGNETTLEKSDSIWKELVLDAKERGCFHNADEDKKLAEAIEDALLEI 895

Query: 132  ELLYEPVSPFKKLSLRDKSDSAATSSR 52
            E L E  SPFKKLSL+ KS++ AT+SR
Sbjct: 896  EFLDESESPFKKLSLQGKSETFATTSR 922


>ref|XP_003616118.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517453|gb|AES99076.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 950

 Score =  216 bits (549), Expect = 2e-54
 Identities = 107/141 (75%), Positives = 124/141 (87%)
 Frame = -3

Query: 492  QVYEIHEKVKQYISVSDPYFSVSVRSVDGFQGGEEDIVIISTVRSNGSGKVGFLSDRQRA 313
            QV+EI E+VKQY+ VS P FS++VRSVDGFQGGEED++IISTVRSN  GKVGFLS+RQR 
Sbjct: 806  QVHEIQERVKQYM-VSAPNFSINVRSVDGFQGGEEDLIIISTVRSNFGGKVGFLSNRQRT 864

Query: 312  NVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKKLAQAIEDALFEF 133
            NV+ITRARYCLWI+GNATTLINSNS W K+V+DAK+RNCFH+ADEDKKL Q IEDA FEF
Sbjct: 865  NVAITRARYCLWIVGNATTLINSNSVWRKVVMDAKQRNCFHNADEDKKLDQVIEDACFEF 924

Query: 132  ELLYEPVSPFKKLSLRDKSDS 70
            ELL E  S F KLS+RDKS++
Sbjct: 925  ELLDESESAFNKLSIRDKSET 945


>ref|XP_003616126.1| DNA-binding protein SMUBP-2 [Medicago truncatula]
            gi|355517461|gb|AES99084.1| DNA-binding protein SMUBP-2
            [Medicago truncatula]
          Length = 1046

 Score =  214 bits (546), Expect = 4e-54
 Identities = 110/146 (75%), Positives = 123/146 (84%)
 Frame = -3

Query: 492  QVYEIHEKVKQYISVSDPYFSVSVRSVDGFQGGEEDIVIISTVRSNGSGKVGFLSDRQRA 313
            QV+EI EKVKQYI+VSD  FSVSVRSVDGFQGGEEDI+IISTVRSN SGKVGFLS+RQR 
Sbjct: 892  QVFEIQEKVKQYIAVSDTDFSVSVRSVDGFQGGEEDIIIISTVRSNESGKVGFLSNRQRV 951

Query: 312  NVSITRARYCLWILGNATTLINSNSAWSKLVLDAKERNCFHDADEDKKLAQAIEDALFEF 133
            NV+ITRARYCLWILGNA TLINS+S W  +VLDAK R+CFH+A E+KKLA+AI D LFE 
Sbjct: 952  NVAITRARYCLWILGNAATLINSDSVWRNVVLDAKRRDCFHNAAENKKLARAINDVLFEI 1011

Query: 132  ELLYEPVSPFKKLSLRDKSDSAATSS 55
            +LL    SPFKKLSL  KS+   TSS
Sbjct: 1012 KLLDGSESPFKKLSLGGKSEKPTTSS 1037


Top