BLASTX nr result

ID: Glycyrrhiza23_contig00031110 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031110
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi...   147   7e-34
ref|XP_003538401.1| PREDICTED: pentatricopeptide repeat-containi...   141   5e-32
emb|CBI33534.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
ref|XP_004173996.1| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30

>ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 485

 Score =  147 bits (372), Expect = 7e-34
 Identities = 69/100 (69%), Positives = 83/100 (83%)
 Frame = +2

Query: 134 LSAKTKSLFEIISTTPSLSVETSLIESGITVTPQDVEEVLKLSYRFPGQAVKFFRWAGHN 313
           L +  KSL  +I+TT + SVE SL  + I+VTP DVEEVLKLSY FPGQAVKFFRW+G +
Sbjct: 38  LPSNIKSLCHLIATTSAASVEHSLQSAAISVTPHDVEEVLKLSYGFPGQAVKFFRWSGRH 97

Query: 314 LNHNHTPHAWNLVIDLLGNNRFFDAMWDAVKSMRREGLLS 433
           LN NHTP++WNLV+D+LG NRFFDAMWDA+KSM +EGLLS
Sbjct: 98  LNDNHTPYSWNLVVDILGKNRFFDAMWDAIKSMNKEGLLS 137


>ref|XP_003538401.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Glycine max]
          Length = 486

 Score =  141 bits (356), Expect = 5e-32
 Identities = 66/100 (66%), Positives = 81/100 (81%)
 Frame = +2

Query: 134 LSAKTKSLFEIISTTPSLSVETSLIESGITVTPQDVEEVLKLSYRFPGQAVKFFRWAGHN 313
           L +  KSL  +I+TT + +VE SL  + I+V P DVEEVLKLSY FPGQ+VKFFRW+G +
Sbjct: 39  LPSNIKSLCHLIATTSAATVEHSLQSAAISVIPHDVEEVLKLSYGFPGQSVKFFRWSGRH 98

Query: 314 LNHNHTPHAWNLVIDLLGNNRFFDAMWDAVKSMRREGLLS 433
           LN NHTP++WNLV+D+LG NRFFD MWDAVKSM +EGLLS
Sbjct: 99  LNDNHTPYSWNLVVDILGRNRFFDPMWDAVKSMNKEGLLS 138


>emb|CBI33534.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/100 (64%), Positives = 81/100 (81%)
 Frame = +2

Query: 134 LSAKTKSLFEIISTTPSLSVETSLIESGITVTPQDVEEVLKLSYRFPGQAVKFFRWAGHN 313
           LS K + L EII+ TPS +VE  L ++ I V+P+DVE+ LKLSY FPG AVKFFRW+GH 
Sbjct: 59  LSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFPGSAVKFFRWSGHQ 118

Query: 314 LNHNHTPHAWNLVIDLLGNNRFFDAMWDAVKSMRREGLLS 433
           LN NH+P++WNLV+D+LG N  FDAMWDAVKSM+++GLLS
Sbjct: 119 LNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLS 158


>ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like [Vitis vinifera]
          Length = 502

 Score =  139 bits (349), Expect = 3e-31
 Identities = 64/100 (64%), Positives = 81/100 (81%)
 Frame = +2

Query: 134 LSAKTKSLFEIISTTPSLSVETSLIESGITVTPQDVEEVLKLSYRFPGQAVKFFRWAGHN 313
           LS K + L EII+ TPS +VE  L ++ I V+P+DVE+ LKLSY FPG AVKFFRW+GH 
Sbjct: 55  LSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFPGSAVKFFRWSGHQ 114

Query: 314 LNHNHTPHAWNLVIDLLGNNRFFDAMWDAVKSMRREGLLS 433
           LN NH+P++WNLV+D+LG N  FDAMWDAVKSM+++GLLS
Sbjct: 115 LNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLS 154


>ref|XP_004173996.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 391

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/100 (63%), Positives = 79/100 (79%)
 Frame = +2

Query: 134 LSAKTKSLFEIISTTPSLSVETSLIESGITVTPQDVEEVLKLSYRFPGQAVKFFRWAGHN 313
           L  + K + EII+ +PSL VE +L ++GI  T QDVEEVLKLSYRFPG +VKFFRW+G  
Sbjct: 70  LPFQIKLMCEIIANSPSLDVEKALEDTGIHATQQDVEEVLKLSYRFPGSSVKFFRWSGRK 129

Query: 314 LNHNHTPHAWNLVIDLLGNNRFFDAMWDAVKSMRREGLLS 433
           LN  H+P+AWNL+ID+LG N +FD MWDA+KSM+ EGLLS
Sbjct: 130 LNDQHSPYAWNLIIDMLGKNLYFDPMWDAMKSMKSEGLLS 169


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