BLASTX nr result

ID: Glycyrrhiza23_contig00031090 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00031090
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]   191   5e-47
emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]   178   5e-43
emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]   174   7e-42
gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]                   172   3e-41
emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]   172   3e-41

>emb|CAN74984.1| hypothetical protein VITISV_035210 [Vitis vinifera]
          Length = 2408

 Score =  191 bits (485), Expect = 5e-47
 Identities = 91/113 (80%), Positives = 99/113 (87%)
 Frame = +3

Query: 3    LIAYTDSDYAGDIDDRKSTSGHVFLLGTGAISWSSKKQPVVSLSTTEAEFIXXXXXXXQG 182
            LIAYTDSDYAGD+DDRKSTSG+VFLL  G +SWSSKKQPVV+LSTTEAEF+       QG
Sbjct: 882  LIAYTDSDYAGDVDDRKSTSGYVFLLSEGVVSWSSKKQPVVTLSTTEAEFVAAASCACQG 941

Query: 183  VWLRRVLSQLGHSQDKCTTIYCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL 341
            VW+RRVL +L HSQ KCTT+ CDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL
Sbjct: 942  VWMRRVLEKLCHSQGKCTTVLCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL 994



 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 37/81 (45%), Positives = 49/81 (60%)
 Frame = +3

Query: 93   ISWSSKKQPVVSLSTTEAEFIXXXXXXXQGVWLRRVLSQLGHSQDKCTTIYCDNSSTIKL 272
            ISW SKKQ  V+ S+TEAE+        + +WLR +L  LG S    T +YCDN S I +
Sbjct: 2282 ISWRSKKQTFVARSSTEAEYRALADTTSELLWLRWLLKDLGVSTSSATPLYCDNQSAIHI 2341

Query: 273  SKNPVMHGRSKHIDVRFHFLR 335
            + N V H R+KHI +  HF+R
Sbjct: 2342 AHNDVFHERTKHIKIDCHFIR 2362


>emb|CAN74283.1| hypothetical protein VITISV_032452 [Vitis vinifera]
          Length = 1338

 Score =  178 bits (451), Expect = 5e-43
 Identities = 85/113 (75%), Positives = 95/113 (84%)
 Frame = +3

Query: 3    LIAYTDSDYAGDIDDRKSTSGHVFLLGTGAISWSSKKQPVVSLSTTEAEFIXXXXXXXQG 182
            LIAYTDSDYAGD+DDRKSTSG+VF+L +GA+SWSSKKQPVVSLSTTEAEFI       Q 
Sbjct: 1180 LIAYTDSDYAGDLDDRKSTSGYVFMLSSGAVSWSSKKQPVVSLSTTEAEFIAATSCVCQA 1239

Query: 183  VWLRRVLSQLGHSQDKCTTIYCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL 341
            +WLRR+L  L H+Q   TT+YCDNSSTIKLSKN VMHGR KHIDV FHFLR+L
Sbjct: 1240 IWLRRILEGLNHAQHDSTTVYCDNSSTIKLSKNLVMHGRCKHIDVHFHFLREL 1292


>emb|CAN76698.1| hypothetical protein VITISV_011792 [Vitis vinifera]
          Length = 1084

 Score =  174 bits (441), Expect = 7e-42
 Identities = 81/103 (78%), Positives = 91/103 (88%)
 Frame = +3

Query: 33   GDIDDRKSTSGHVFLLGTGAISWSSKKQPVVSLSTTEAEFIXXXXXXXQGVWLRRVLSQL 212
            GD+DDRKSTSG+VFLL  GA++WSSKKQPVV+LSTTEAEF+       QGVW++RVL +L
Sbjct: 936  GDVDDRKSTSGYVFLLSEGAVAWSSKKQPVVTLSTTEAEFVAAASCACQGVWMKRVLEKL 995

Query: 213  GHSQDKCTTIYCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL 341
            GHSQ KCTT+ CDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL
Sbjct: 996  GHSQGKCTTVLCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL 1038


>gb|AFP55578.1| copia-type polyprotein [Rosa rugosa]
          Length = 1187

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/113 (70%), Positives = 96/113 (84%)
 Frame = +3

Query: 3    LIAYTDSDYAGDIDDRKSTSGHVFLLGTGAISWSSKKQPVVSLSTTEAEFIXXXXXXXQG 182
            L+ YTDSDYAGD+D ++STSG VF+L  GA+SWSS+KQ VV+LSTTEAE++       Q 
Sbjct: 1029 LVGYTDSDYAGDMDGKRSTSGFVFMLSGGAVSWSSRKQHVVTLSTTEAEYVAAAGCACQS 1088

Query: 183  VWLRRVLSQLGHSQDKCTTIYCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL 341
            VW+RRVL++LG+SQ KC T++CDNSSTIKLSKNPV HGRSKHIDVRFHFLRDL
Sbjct: 1089 VWMRRVLNKLGYSQCKCVTMFCDNSSTIKLSKNPVFHGRSKHIDVRFHFLRDL 1141


>emb|CAN81156.1| hypothetical protein VITISV_016610 [Vitis vinifera]
          Length = 1021

 Score =  172 bits (435), Expect = 3e-41
 Identities = 83/113 (73%), Positives = 95/113 (84%)
 Frame = +3

Query: 3    LIAYTDSDYAGDIDDRKSTSGHVFLLGTGAISWSSKKQPVVSLSTTEAEFIXXXXXXXQG 182
            L AYTDSDYAGD++D+KSTSG+VFLL + A+SWSS+KQPVVSLSTTEAEFI       Q 
Sbjct: 868  LAAYTDSDYAGDLEDKKSTSGYVFLLSSRAVSWSSRKQPVVSLSTTEAEFIAAASCACQA 927

Query: 183  VWLRRVLSQLGHSQDKCTTIYCDNSSTIKLSKNPVMHGRSKHIDVRFHFLRDL 341
            VWL+RVL +L  +Q K TTI+CDNSS IKLSKNPVMHGRSKHIDVRFHFL +L
Sbjct: 928  VWLKRVLGKLSQNQGKSTTIHCDNSSAIKLSKNPVMHGRSKHIDVRFHFLXEL 980


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